RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 CHRNDQ07001 517 aa16.55■□□□□ 0.24
PTPRN-203ENST00000412847 MTMR14Q8NCE2 650 aa16.55■□□□□ 0.24
PTPRN-203ENST00000412847 ERO1AQ96HE7 468 aa16.55■□□□□ 0.24
PTPRN-203ENST00000412847 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 MYO1BO43795 1136 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 GCKRQ14397 625 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 G2E3Q7L622 706 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
PTPRN-203ENST00000412847 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
PTPRN-203ENST00000412847 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 UNCXA6NJT0 531 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 CSF1RP07333 972 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
PTPRN-203ENST00000412847 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 F8W031 263 aaPredicted RBP16.52■□□□□ 0.24
PTPRN-203ENST00000412847 CASP7P55210 303 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 CRHR2Q13324 411 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.24
PTPRN-203ENST00000412847 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 OTUD7BQ6GQQ9 843 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.24
PTPRN-203ENST00000412847 VEZTQ9HBM0 779 aa16.52■□□□□ 0.24
PTPRN-203ENST00000412847 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
PTPRN-203ENST00000412847 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
PTPRN-203ENST00000412847 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
PTPRN-203ENST00000412847 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
PTPRN-203ENST00000412847 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
PTPRN-203ENST00000412847 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
PTPRN-203ENST00000412847 C15orf52Q6ZUT6 534 aaKnown RBP16.51■□□□□ 0.23
PTPRN-203ENST00000412847 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
PTPRN-203ENST00000412847 SNAP23O00161 211 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 TAF5LO75529 589 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 IL1R1P14778 569 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 GJA5P36382 358 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 FLIIQ13045 1269 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 ANKRD13AQ8IZ07 590 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
PTPRN-203ENST00000412847 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 HTTP42858 3142 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
PTPRN-203ENST00000412847 AOX1Q06278 1338 aa16.49■□□□□ 0.23
PTPRN-203ENST00000412847 MGAMO43451 1857 aa16.49■□□□□ 0.23
PTPRN-203ENST00000412847 FKBP5Q13451 457 aaPredicted RBP16.49■□□□□ 0.23
PTPRN-203ENST00000412847 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
PTPRN-203ENST00000412847 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
PTPRN-203ENST00000412847 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
PTPRN-203ENST00000412847 USP2O75604 605 aaPredicted RBP16.48■□□□□ 0.23
PTPRN-203ENST00000412847 RBM5P52756 815 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRN-203ENST00000412847 SP3Q02447 781 aa16.48■□□□□ 0.23
PTPRN-203ENST00000412847 IFIT5Q13325 482 aaKnown RBP16.48■□□□□ 0.23
PTPRN-203ENST00000412847 RASA3Q14644 834 aa16.48■□□□□ 0.23
PTPRN-203ENST00000412847 JAG2Q9Y219 1238 aa16.48■□□□□ 0.23
PTPRN-203ENST00000412847 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
PTPRN-203ENST00000412847 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
PTPRN-203ENST00000412847 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
PTPRN-203ENST00000412847 PTPN18Q99952 460 aa16.47■□□□□ 0.23
PTPRN-203ENST00000412847 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
PTPRN-203ENST00000412847 EN2P19622 333 aaPredicted RBP16.46■□□□□ 0.23
PTPRN-203ENST00000412847 TNFAIP1Q13829 316 aa16.46■□□□□ 0.23
PTPRN-203ENST00000412847 FOXO4P98177 505 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 CAP1Q01518 475 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
PTPRN-203ENST00000412847 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
PTPRN-203ENST00000412847 ZNF333Q96JL9 665 aa16.44■□□□□ 0.22
PTPRN-203ENST00000412847 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
PTPRN-203ENST00000412847 PLIN1O60240 522 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 ARHGEF6Q15052 776 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
PTPRN-203ENST00000412847 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
PTPRN-203ENST00000412847 CNNM1Q9NRU3 951 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
PTPRN-203ENST00000412847 IL16Q14005 1332 aa16.43■□□□□ 0.22
PTPRN-203ENST00000412847 DOCK2Q92608 1830 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 CENPFP49454 3210 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 CCL15-CCL14A0A0B4J2E2 113 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 VGLL4Q14135 290 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 CCL15Q16663 113 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 BRI3BPQ8WY22 251 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
PTPRN-203ENST00000412847 TEPSINQ96N21 525 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
PTPRN-203ENST00000412847 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms