RNA–Protein interactions for RNA: ENST00000412678.6

CDHR4-202, Transcript of cadherin related family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR4, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-202ENST00000412678 H0YHG0 523 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 GPTP24298 496 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 FOSBP53539 338 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
CDHR4-202ENST00000412678 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
CDHR4-202ENST00000412678 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 TAF6LQ9Y6J9 622 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 ATP7BP35670 1465 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 EBAG9O00559 213 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
CDHR4-202ENST00000412678 GNG11P61952 73 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
CDHR4-202ENST00000412678 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 FAXDC2Q96IV6 333 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 COG3Q96JB2 828 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 CABS1Q96KC9 395 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 MCM8Q9UJA3 840 aa13.15□□□□□ -0.3
CDHR4-202ENST00000412678 RDXP35241 583 aaKnown RBP13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 BIRC2Q13490 618 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
CDHR4-202ENST00000412678 FAM169AQ9Y6X4 670 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 H3BQV1 296 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CRB1P82279 1406 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 SCRN1Q12765 414 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 RESTQ13127 1097 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 TUBB2AQ13885 445 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CASP8Q14790 479 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 FBXW10Q5XX13 1052 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CEP112Q8N8E3 955 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
CDHR4-202ENST00000412678 KCNB2Q92953 911 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 BRF1Q92994 677 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 FMNL2Q96PY5 1086 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 TUBB2BQ9BVA1 445 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 PPP2R2CQ9Y2T4 447 aa13.14□□□□□ -0.31
CDHR4-202ENST00000412678 INPP5BP32019 993 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 NF2P35240 595 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
CDHR4-202ENST00000412678 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
CDHR4-202ENST00000412678 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 ANKZF1Q9H8Y5 726 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 SLC27A2O14975 620 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 CHUKO15111 745 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 KIFC2Q96AC6 838 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 WDR24Q96S15 920 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
CDHR4-202ENST00000412678 CHD2O14647 1828 aaKnown RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 ATXN2Q99700 1313 aaKnown RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 CRYMQ14894 314 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 ANKRD1Q15327 319 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 ZKSCAN8Q15776 578 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 NEBLO76041 1014 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 PSMA5P28066 241 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 AARSP49588 968 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 FAM160A1Q05DH4 1040 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
CDHR4-202ENST00000412678 DHX58Q96C10 678 aa13.12□□□□□ -0.31
CDHR4-202ENST00000412678 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
CDHR4-202ENST00000412678 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
CDHR4-202ENST00000412678 CUTAO60888 179 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 RNF40O75150 1001 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 POLA2Q14181 598 aa13.11□□□□□ -0.31
CDHR4-202ENST00000412678 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
CDHR4-202ENST00000412678 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 N4BP2L2Q92802 583 aaPredicted RBP13.1□□□□□ -0.31
CDHR4-202ENST00000412678 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 RCOR1Q9UKL0 485 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 PHACTR2O75167 634 aa13.1□□□□□ -0.31
CDHR4-202ENST00000412678 ADD1P35611 737 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms