RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 TBC1D16Q8TBP0 767 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 LPIN2Q92539 896 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 GGA1Q9UJY5 639 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 NSFL1CQ9UNZ2 370 aaKnown RBP10.79□□□□□ -0.68
LINC02539-201ENST00000411615 BCS1LQ9Y276 419 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 ZNF804BA4D1E1 1349 aa10.79□□□□□ -0.68
LINC02539-201ENST00000411615 IFIT1P09914 478 aaKnown RBP10.78□□□□□ -0.68
LINC02539-201ENST00000411615 ATP2B3Q16720 1220 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 TNNI3KQ59H18 835 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 ANKRD45Q5TZF3 282 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
LINC02539-201ENST00000411615 EYA3Q99504 573 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 FPGT-TNNI3KV9GXZ4 949 aa10.78□□□□□ -0.68
LINC02539-201ENST00000411615 A0A1B0GUL7 405 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 FAM205CA6NFA0 338 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 TAF5LO75529 589 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 UFL1O94874 794 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 SLC5A1P13866 664 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 KCNJ4P48050 445 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 EMP3P54852 163 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC02539-201ENST00000411615 CHD1LQ86WJ1 897 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.69
LINC02539-201ENST00000411615 POLLQ9UGP5 575 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 IRS2Q9Y4H2 1338 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 DUOX1Q9NRD9 1551 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 MED23Q9ULK4 1368 aa10.77□□□□□ -0.69
LINC02539-201ENST00000411615 ZNF609O15014 1411 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 C6orf229H3BNL8 230 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 GRIN3BO60391 1043 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 TIMM10P62072 90 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 OLFM4Q6UX06 510 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 ZNF512BQ96KM6 892 aaPredicted RBP10.76□□□□□ -0.69
LINC02539-201ENST00000411615 ZC3H12CQ9C0D7 883 aaKnown RBP10.76□□□□□ -0.69
LINC02539-201ENST00000411615 IL1RAPL2Q9NP60 686 aa10.76□□□□□ -0.69
LINC02539-201ENST00000411615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
LINC02539-201ENST00000411615 APBB1O00213 710 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
LINC02539-201ENST00000411615 YBX3P16989 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
LINC02539-201ENST00000411615 KIAA2012Q0VF49 1180 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 CAVIN4Q5BKX8 364 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 FBXO33Q7Z6M2 555 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 AACSQ86V21 672 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 TAOK3Q9H2K8 898 aa10.75□□□□□ -0.69
LINC02539-201ENST00000411615 NFKBIEO00221 500 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 HIBADHP31937 336 aaKnown RBP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 CCDC158Q5M9N0 1113 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 GPATCH3Q96I76 525 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 FAM84BQ96KN1 310 aaPredicted RBP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 NEUROD6Q96NK8 337 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 COA1Q9GZY4 146 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 OSBPL3Q9H4L5 887 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 DBNLQ9UJU6 430 aaKnown RBP10.74□□□□□ -0.69
LINC02539-201ENST00000411615 TTC41PQ6P2S7 1318 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 SALL3Q9BXA9 1300 aa10.74□□□□□ -0.69
LINC02539-201ENST00000411615 SBF1O95248 1867 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 WTIPA6NIX2 430 aaPredicted RBP10.73□□□□□ -0.69
LINC02539-201ENST00000411615 SNAP23O00161 211 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 SEMA3EO15041 775 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 UQCRFS1P1P0C7P4 283 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 IL1R1P14778 569 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 GPR162Q16538 588 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 GORABQ5T7V8 394 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 ARHGAP27Q6ZUM4 889 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 PODNQ7Z5L7 613 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC02539-201ENST00000411615 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
LINC02539-201ENST00000411615 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 AOX1Q06278 1338 aa10.73□□□□□ -0.69
LINC02539-201ENST00000411615 DICER1Q9UPY3 1922 aaKnown RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 IGSF3O75054 1194 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 ATP5JP18859 108 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 LMNB1P20700 586 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 ARID4AP29374 1257 aaPredicted RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 ADORA1P30542 326 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 TXNRD3Q86VQ6 643 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 C16orf71Q8IYS4 520 aaPredicted RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 TDRD7Q8NHU6 1098 aaKnown RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 CD209Q9NNX6 404 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 ECHDC1Q9NTX5 307 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 WWC3Q9ULE0 1092 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 PDS5AQ29RF7 1337 aaKnown RBP10.72□□□□□ -0.69
LINC02539-201ENST00000411615 CHD4Q14839 1912 aa10.72□□□□□ -0.69
LINC02539-201ENST00000411615 ERC2O15083 957 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms