RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 XKR5Q6UX68 686 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 DTX1Q86Y01 620 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 CACTIN-AS1Q8N1I8 211 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 FBXL6Q8N531 539 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 KLHL23Q8NBE8 558 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 GTF3C2Q8WUA4 911 aaPredicted RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 OSMRQ99650 979 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 RUSC1Q9BVN2 902 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 ANO2Q9NQ90 1003 aa3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 FNDC3AQ9Y2H6 1198 aaKnown RBP3.49□□□□□ -1.85
RNU2-55P-201ENST00000411146 ECEL1O95672 775 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 MAP4P27816 1152 aaKnown RBP3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 NOM1Q5C9Z4 860 aaKnown RBP3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 DCAF11Q8TEB1 546 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 FBLIM1Q8WUP2 373 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 DBNDD2Q9BQY9 259 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 CEP41Q9BYV8 373 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 CCDC87Q9NVE4 849 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 ADGRE2Q9UHX3 823 aa3.48□□□□□ -1.85
RNU2-55P-201ENST00000411146 LOC100289279A0A1B0GTE1 492 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 TMEM88BA6NKF7 163 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 RBAK-RBAKDNI3L0D1 243 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 SART1O43290 800 aaKnown RBP3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 FZD6O60353 706 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 TNFRSF21O75509 655 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 YBX3P16989 372 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 PIP4K2BP78356 416 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 SPRED3Q2MJR0 410 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 UVSSAQ2YD98 709 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 FAM117BQ6P1L5 589 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 ABI1Q8IZP0 508 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 ABTB2Q8N961 1025 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 TMEM102Q8N9M5 508 aaPredicted RBP3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 C12orf50Q8NA57 414 aaPredicted RBP3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 HELQQ8TDG4 1101 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 PBXIP1Q96AQ6 731 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 USP26Q9BXU7 913 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 TMPRSS13Q9BYE2 586 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 OSGEPQ9NPF4 335 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 FAM13BQ9NYF5 915 aa3.47□□□□□ -1.85
RNU2-55P-201ENST00000411146 MEGF11A6BM72 1044 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 FAM170BA6NMN3 283 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 TIAF1O95411 115 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 ESRRAP11474 423 aaPredicted RBP3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 SSFA2P28290 1259 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 MZF1P28698 734 aaPredicted RBP3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 RXRBP28702 533 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 C19orf57Q0VDD7 668 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZNF423Q2M1K9 1284 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 USPL1Q5W0Q7 1092 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 INTS5Q6P9B9 1019 aaKnown RBP3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 ASAP3Q8TDY4 903 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 GATA6Q92908 595 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 RNF208Q9H0X6 261 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 C1orf115Q9H7X2 142 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 RNF114Q9Y508 228 aa3.46□□□□□ -1.86
RNU2-55P-201ENST00000411146 DYNC1LI2O43237 492 aaPredicted RBP3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 WNT11O96014 354 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 GRIA4P48058 902 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 GSTM4Q03013 218 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 IKBKEQ14164 716 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 NFKBIBQ15653 356 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 ECM1Q16610 540 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 MSMPQ1L6U9 139 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 ANKRD34AQ69YU3 496 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 FDX2Q6P4F2 183 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 C2CD4AQ8NCU7 369 aaPredicted RBP3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 BSNDQ8WZ55 320 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 NRSN2Q9GZP1 204 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 LGR6Q9HBX8 967 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 PIM2Q9P1W9 311 aa3.45□□□□□ -1.86
RNU2-55P-201ENST00000411146 PHACTR2O75167 634 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 NFICP08651 508 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 GRIK1P39086 918 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 CABP4P57796 275 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZNF211Q13398 564 aaPredicted RBP3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 FZD5Q13467 585 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 NUTM2GQ5VZR2 741 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 SMG8Q8ND04 991 aaKnown RBP3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 WNT8BQ93098 351 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 TCF12Q99081 682 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 ZFYVE28Q9HCC9 887 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 CCDC39Q9UFE4 941 aa3.44□□□□□ -1.86
RNU2-55P-201ENST00000411146 FAM95CA0A1B0GW59 222 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 A0A1W2PP55 124 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 GAS2O43903 313 aaKnown RBP3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 NPR3P17342 541 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 SOX4Q06945 474 aaPredicted RBP3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 AAMPQ13685 434 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 EXOSC6Q5RKV6 272 aaKnown RBP3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 WFDC3Q8IUB2 231 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 TRIM56Q9BRZ2 755 aaKnown RBP3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 BHLHE41Q9C0J9 482 aaPredicted RBP3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 SUGCTQ9HAC7 445 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 PRKAG2Q9UGJ0 569 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 ACTL7BQ9Y614 415 aa3.43□□□□□ -1.86
RNU2-55P-201ENST00000411146 U3KQE9 123 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms