RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.19■■□□□ 1.62
C4orf48-202ENST00000409860 PDS5AQ29RF7 1337 aaKnown RBP25.18■■□□□ 1.62
C4orf48-202ENST00000409860 FAM205AQ6ZU69 1335 aa25.18■■□□□ 1.62
C4orf48-202ENST00000409860 SALL3Q9BXA9 1300 aa25.18■■□□□ 1.62
C4orf48-202ENST00000409860 ZNF541Q9H0D2 1346 aa25.18■■□□□ 1.62
C4orf48-202ENST00000409860 ATP5JP18859 108 aa25.18■■□□□ 1.62
C4orf48-202ENST00000409860 KCNQ5Q9NR82 932 aa25.18■■□□□ 1.62
C4orf48-202ENST00000409860 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
C4orf48-202ENST00000409860 ERC2O15083 957 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 MCAMP43121 646 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 SPATA5Q8NB90 893 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 HMG20BQ9P0W2 317 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 JAG2Q9Y219 1238 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
C4orf48-202ENST00000409860 PSMD14O00487 310 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 SCARF1Q14162 830 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 TIAM2Q8IVF5 1701 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 WDR66Q8TBY9 1149 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 TBC1D22AQ8WUA7 517 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 STAP2Q9UGK3 403 aa25.16■■□□□ 1.62
C4orf48-202ENST00000409860 COL1A1P02452 1464 aaPredicted RBP25.15■■□□□ 1.62
C4orf48-202ENST00000409860 GLRX3O76003 335 aaKnown RBP25.15■■□□□ 1.62
C4orf48-202ENST00000409860 PDE4AP27815 886 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 PDE1AP54750 535 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 DACT2Q5SW24 774 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 TSHZ3Q63HK5 1081 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 DPY19L2Q6NUT2 758 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 GJA3Q9Y6H8 435 aa25.15■■□□□ 1.62
C4orf48-202ENST00000409860 AOX1Q06278 1338 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 VIL1P09327 827 aaKnown RBP25.14■■□□□ 1.62
C4orf48-202ENST00000409860 FKBP1AP62942 108 aaKnown RBP25.14■■□□□ 1.62
C4orf48-202ENST00000409860 PI16Q6UXB8 463 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 PLEKHM2Q8IWE5 1019 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 GPC2Q8N158 579 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 BOLA2Q9H3K6 86 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 SNRKQ9NRH2 765 aa25.14■■□□□ 1.62
C4orf48-202ENST00000409860 MYO3BQ8WXR4 1341 aa25.13■■□□□ 1.61
C4orf48-202ENST00000409860 MFSD14BQ5SR56 506 aa25.13■■□□□ 1.61
C4orf48-202ENST00000409860 RSBN1LQ6PCB5 846 aaPredicted RBP25.13■■□□□ 1.61
C4orf48-202ENST00000409860 ZGPATQ8N5A5 531 aaKnown RBP25.13■■□□□ 1.61
C4orf48-202ENST00000409860 DNAJC2Q99543 621 aaKnown RBP25.13■■□□□ 1.61
C4orf48-202ENST00000409860 ZAP70P43403 619 aa25.12■■□□□ 1.61
C4orf48-202ENST00000409860 PI4K2BQ8TCG2 481 aa25.12■■□□□ 1.61
C4orf48-202ENST00000409860 HAUS7Q99871 368 aa25.12■■□□□ 1.61
C4orf48-202ENST00000409860 SALL1Q9NSC2 1324 aa25.12■■□□□ 1.61
C4orf48-202ENST00000409860 SCN9AQ15858 1988 aa25.11■■□□□ 1.61
C4orf48-202ENST00000409860 RPS12P25398 132 aaKnown RBP25.11■■□□□ 1.61
C4orf48-202ENST00000409860 AGBL3Q8NEM8 1001 aa25.11■■□□□ 1.61
C4orf48-202ENST00000409860 OSBPL3Q9H4L5 887 aa25.11■■□□□ 1.61
C4orf48-202ENST00000409860 UTRNP46939 3433 aa25.11■■□□□ 1.61
C4orf48-202ENST00000409860 CHD4Q14839 1912 aa25.1■■□□□ 1.61
C4orf48-202ENST00000409860 GLTPD2A6NH11 291 aa25.1■■□□□ 1.61
C4orf48-202ENST00000409860 MXD3Q9BW11 206 aa25.1■■□□□ 1.61
C4orf48-202ENST00000409860 DDNO94850 711 aaPredicted RBP25.09■■□□□ 1.61
C4orf48-202ENST00000409860 TTF1Q15361 905 aaPredicted RBP25.09■■□□□ 1.61
C4orf48-202ENST00000409860 SPTY2D1Q68D10 685 aaPredicted RBP25.09■■□□□ 1.61
C4orf48-202ENST00000409860 CERS5Q8N5B7 392 aa25.09■■□□□ 1.61
C4orf48-202ENST00000409860 ABCF2Q9UG63 623 aa25.09■■□□□ 1.61
C4orf48-202ENST00000409860 SUGT1Q9Y2Z0 365 aa25.09■■□□□ 1.61
C4orf48-202ENST00000409860 ZBTB12Q9Y330 459 aaPredicted RBP25.09■■□□□ 1.61
C4orf48-202ENST00000409860 NDUFB9Q9Y6M9 179 aa25.09■■□□□ 1.61
C4orf48-202ENST00000409860 CYP2E1P05181 493 aaPredicted RBP25.08■■□□□ 1.61
C4orf48-202ENST00000409860 GMPSP49915 693 aaPredicted RBP25.08■■□□□ 1.61
C4orf48-202ENST00000409860 PAG1Q9NWQ8 432 aa25.08■■□□□ 1.61
C4orf48-202ENST00000409860 GOLIM4O00461 696 aa25.07■■□□□ 1.6
C4orf48-202ENST00000409860 DPF2Q92785 391 aa25.07■■□□□ 1.6
C4orf48-202ENST00000409860 LDHBP07195 334 aaKnown RBP25.06■■□□□ 1.6
C4orf48-202ENST00000409860 RGS3P49796 1198 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 TBC1D9Q6ZT07 1266 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 ERICH6Q7L0X2 663 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 GMLQ99445 158 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 LRP2BPQ9P2M1 347 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 PSME4Q14997 1843 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 MYH13Q9UKX3 1938 aa25.06■■□□□ 1.6
C4orf48-202ENST00000409860 F8W031 263 aaPredicted RBP25.05■■□□□ 1.6
C4orf48-202ENST00000409860 LMOD1P29536 600 aaPredicted RBP25.05■■□□□ 1.6
C4orf48-202ENST00000409860 KIAA0825Q8IV33 1275 aa25.05■■□□□ 1.6
C4orf48-202ENST00000409860 L3MBTL3Q96JM7 780 aaPredicted RBP25.05■■□□□ 1.6
C4orf48-202ENST00000409860 ANTXR1Q9H6X2 564 aa25.05■■□□□ 1.6
C4orf48-202ENST00000409860 PIH1D3Q9NQM4 214 aaKnown RBP25.05■■□□□ 1.6
C4orf48-202ENST00000409860 HDAC9Q9UKV0 1011 aa25.05■■□□□ 1.6
C4orf48-202ENST00000409860 MAST3O60307 1309 aa25.05■■□□□ 1.6
C4orf48-202ENST00000409860 IGSF3O75054 1194 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 USP17L8P0C7I0 530 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 PRDX5P30044 214 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 SKAP1Q86WV1 359 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 DZIP1Q86YF9 867 aaKnown RBP25.04■■□□□ 1.6
C4orf48-202ENST00000409860 OGFOD1Q8N543 542 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 EDC3Q96F86 508 aaKnown RBP25.04■■□□□ 1.6
C4orf48-202ENST00000409860 RAI14Q9P0K7 980 aa25.04■■□□□ 1.6
C4orf48-202ENST00000409860 TTF2Q9UNY4 1162 aaKnown RBP25.04■■□□□ 1.6
C4orf48-202ENST00000409860 MAP4K4O95819 1239 aaPredicted RBP25.03■■□□□ 1.6
C4orf48-202ENST00000409860 MMP14P50281 582 aa25.03■■□□□ 1.6
C4orf48-202ENST00000409860 TTC22Q5TAA0 569 aa25.03■■□□□ 1.6
C4orf48-202ENST00000409860 AKAP11Q9UKA4 1901 aa25.03■■□□□ 1.6
C4orf48-202ENST00000409860 IDH1O75874 414 aaKnown RBP25.02■■□□□ 1.6
C4orf48-202ENST00000409860 SCNN1DP51172 638 aa25.02■■□□□ 1.6
C4orf48-202ENST00000409860 MAP3K12Q12852 859 aa25.02■■□□□ 1.6
C4orf48-202ENST00000409860 GRIK5Q16478 980 aa25.02■■□□□ 1.6
C4orf48-202ENST00000409860 MICALL2Q8IY33 904 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms