RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 A0A1B0GUL7 405 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 HSPA6P17066 643 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-205ENST00000409810 TRPM4Q8TD43 1214 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 TBC1D22AQ8WUA7 517 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 GMLQ99445 158 aa13.46□□□□□ -0.25
CHMP3-205ENST00000409810 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 SEMA3EO15041 775 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 BCAMP50895 628 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 TBC1D10BQ4KMP7 808 aaPredicted RBP13.45□□□□□ -0.26
CHMP3-205ENST00000409810 MFSD14BQ5SR56 506 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 SAMD7Q7Z3H4 446 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 GPR108Q9NPR9 543 aa13.45□□□□□ -0.26
CHMP3-205ENST00000409810 CHAF1AQ13111 956 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-205ENST00000409810 GORABQ5T7V8 394 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
CHMP3-205ENST00000409810 KIAA0825Q8IV33 1275 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 XAGE2Q96GT9 111 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 MXD3Q9BW11 206 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 DENND2AQ9ULE3 1009 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
CHMP3-205ENST00000409810 JAG2Q9Y219 1238 aa13.44□□□□□ -0.26
CHMP3-205ENST00000409810 ZBTB22O15209 634 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 APLP1P51693 650 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
CHMP3-205ENST00000409810 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 SUGT1Q9Y2Z0 365 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
CHMP3-205ENST00000409810 MAST3O60307 1309 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 ADORA1P30542 326 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 PHKA1P46020 1223 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 HIRAP54198 1017 aaPredicted RBP13.42□□□□□ -0.26
CHMP3-205ENST00000409810 TIMM10P62072 90 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 AAMPQ13685 434 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 CCDC102BQ68D86 513 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
CHMP3-205ENST00000409810 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 DCPSQ96C86 337 aaKnown RBP13.42□□□□□ -0.26
CHMP3-205ENST00000409810 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
CHMP3-205ENST00000409810 PASKQ96RG2 1323 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-205ENST00000409810 MYO1BO43795 1136 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 RAB11FIP3O75154 756 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 CDC37L1Q7L3B6 337 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 CRBNQ96SW2 442 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
CHMP3-205ENST00000409810 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
CHMP3-205ENST00000409810 PDS5AQ29RF7 1337 aaKnown RBP13.4□□□□□ -0.26
CHMP3-205ENST00000409810 PITPNM2Q9BZ72 1349 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 ITGBL1O95965 494 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-205ENST00000409810 EGFRP00533 1210 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 UQCRFS1P1P0C7P4 283 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 SCARF1Q14162 830 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 SIRT2Q8IXJ6 389 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 MTMR14Q8NCE2 650 aa13.4□□□□□ -0.26
CHMP3-205ENST00000409810 COL1A1P02452 1464 aaPredicted RBP13.4□□□□□ -0.26
CHMP3-205ENST00000409810 SALL1Q9NSC2 1324 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 WNT10BO00744 389 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHMP3-205ENST00000409810 CFAP100Q494V2 611 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 KRT26Q7Z3Y9 468 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 CLASRPQ8N2M8 674 aaKnown RBP13.39□□□□□ -0.27
CHMP3-205ENST00000409810 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 SERPINA10Q9UK55 444 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
CHMP3-205ENST00000409810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-205ENST00000409810 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
CHMP3-205ENST00000409810 TMEM88BA6NKF7 163 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 ARID4AP29374 1257 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-205ENST00000409810 HDLBPQ00341 1268 aaKnown RBP13.38□□□□□ -0.27
CHMP3-205ENST00000409810 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 ANGEL2Q5VTE6 544 aaKnown RBP13.38□□□□□ -0.27
CHMP3-205ENST00000409810 AACSQ86V21 672 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 APOBEC3FQ8IUX4 373 aaKnown RBP13.38□□□□□ -0.27
CHMP3-205ENST00000409810 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 DBNDD2Q9BQY9 259 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-205ENST00000409810 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 AKAP11Q9UKA4 1901 aa13.38□□□□□ -0.27
CHMP3-205ENST00000409810 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
CHMP3-205ENST00000409810 APBB1O00213 710 aa13.37□□□□□ -0.27
CHMP3-205ENST00000409810 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
CHMP3-205ENST00000409810 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
CHMP3-205ENST00000409810 CRKP46108 304 aa13.37□□□□□ -0.27
CHMP3-205ENST00000409810 NBPF9Q3BBW0 867 aa13.37□□□□□ -0.27
CHMP3-205ENST00000409810 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-205ENST00000409810 ZBED3Q96IU2 234 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms