RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 DBNLQ9UJU6 430 aaKnown RBP18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 SH3TC1Q8TE82 1336 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 CTDSPL2Q05D32 466 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 TMCO3Q6UWJ1 677 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 CENPHQ9H3R5 247 aa18.92■□□□□ 0.62
PTPRN2-205ENST00000409483 KIF5CO60282 957 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 CASQ1P31415 396 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 KDRP35968 1356 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 LIG1P18858 919 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 LSG1Q9H089 658 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 TCP11L1Q9NUJ3 509 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 E7EWF7 191 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 NEMFO60524 1076 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 RRAGBQ5VZM2 374 aa18.91■□□□□ 0.62
PTPRN2-205ENST00000409483 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 KIF2AO00139 706 aaPredicted RBP18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 POLR3GO15318 223 aaPredicted RBP18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 ZNF589Q86UQ0 364 aaPredicted RBP18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 CABP5Q9NP86 173 aa18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 TRIM75PA6NK02 468 aa18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 ZNF622Q969S3 477 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 PDCL3Q9H2J4 239 aa18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
PTPRN2-205ENST00000409483 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.62
PTPRN2-205ENST00000409483 ODF2Q5BJF6 829 aa18.89■□□□□ 0.62
PTPRN2-205ENST00000409483 MTMR6Q9Y217 621 aa18.89■□□□□ 0.62
PTPRN2-205ENST00000409483 LDHCP07864 332 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 TMTC2Q8N394 836 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 CACNA2D4Q7Z3S7 1137 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 UNC13BO14795 1591 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 ZNF532Q9HCE3 1301 aa18.89■□□□□ 0.61
PTPRN2-205ENST00000409483 CMTR1Q8N1G2 835 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 OSBPL3Q9H4L5 887 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 RNF17Q9BXT8 1623 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 MCM7P33993 719 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 FAM160A1Q05DH4 1040 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 CBX8Q9HC52 389 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 TFCP2L1Q9NZI6 479 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 TDRD12Q587J7 1177 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 DYNC1I1O14576 645 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 GNPATO15228 680 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 SYCP1Q15431 976 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 TMEM132AQ24JP5 1023 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 ASAP1Q9ULH1 1129 aa18.88■□□□□ 0.61
PTPRN2-205ENST00000409483 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 ERLIN1O75477 346 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 CCDC12Q8WUD4 166 aaPredicted RBP18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 TRIM47Q96LD4 638 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 TMOD2Q9NZR1 351 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 PUM3Q15397 648 aaKnown RBP18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 MADDQ8WXG6 1647 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 PDE8AO60658 829 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 ADORA1P30542 326 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 FKBP15Q5T1M5 1219 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
PTPRN2-205ENST00000409483 CCDC178Q5BJE1 867 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 TPTE2Q6XPS3 522 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 PRIMPOLQ96LW4 560 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 TM6SF1Q9BZW5 370 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 LARGE1O95461 756 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 ZNF174Q15697 407 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 PI16Q6UXB8 463 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 SPA17Q15506 151 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 TMEM266Q2M3C6 531 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 KCNJ14Q9UNX9 436 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 RIMBP2O15034 1052 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 ZNF397Q8NF99 534 aaPredicted RBP18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 TSC1Q92574 1164 aa18.86■□□□□ 0.61
PTPRN2-205ENST00000409483 STAT6P42226 847 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 SLFNL1Q499Z3 407 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 CDK12Q9NYV4 1490 aaPredicted RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 HSPD1P10809 573 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 ANO1Q5XXA6 986 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 BRAPQ7Z569 592 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 AXIN2Q9Y2T1 843 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 LUC7LQ9NQ29 371 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 VWA3AA6NCI4 1184 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 NR1I2O75469 434 aa18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 ADD1P35611 737 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 SAP30BPQ9UHR5 308 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 V9GY48 417 aaPredicted RBP18.85■□□□□ 0.61
PTPRN2-205ENST00000409483 YEATS4O95619 227 aa18.84■□□□□ 0.61
PTPRN2-205ENST00000409483 KANK3Q6NY19 840 aa18.84■□□□□ 0.61
PTPRN2-205ENST00000409483 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms