RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 HAUS7Q99871 368 aa24.97■■□□□ 1.59
VSX1-203ENST00000409285 DENND2AQ9ULE3 1009 aa24.97■■□□□ 1.59
VSX1-203ENST00000409285 RGS3P49796 1198 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 TTC22Q5TAA0 569 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 LARGE2Q8N3Y3 721 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 LMNB1P20700 586 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 SCARF1Q14162 830 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 SPATA5Q8NB90 893 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 HMG20BQ9P0W2 317 aa24.96■■□□□ 1.59
VSX1-203ENST00000409285 ECE2O60344 883 aa24.95■■□□□ 1.58
VSX1-203ENST00000409285 PRELPP51888 382 aa24.95■■□□□ 1.58
VSX1-203ENST00000409285 FAM205AQ6ZU69 1335 aa24.95■■□□□ 1.58
VSX1-203ENST00000409285 DBNDD1Q9H9R9 158 aa24.94■■□□□ 1.58
VSX1-203ENST00000409285 G3V3G9 751 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 DOK7Q18PE1 504 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 BMP2KLQ5H9B9 411 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 DCAF8Q5TAQ9 597 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 NIM1KQ8IY84 436 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 BOLA2Q9H3K6 86 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 SALL1Q9NSC2 1324 aa24.93■■□□□ 1.58
VSX1-203ENST00000409285 JDP2Q8WYK2 163 aa24.92■■□□□ 1.58
VSX1-203ENST00000409285 ZNRF3Q9ULT6 936 aa24.92■■□□□ 1.58
VSX1-203ENST00000409285 IGSF3O75054 1194 aa24.91■■□□□ 1.58
VSX1-203ENST00000409285 FRAT2O75474 233 aaPredicted RBP24.91■■□□□ 1.58
VSX1-203ENST00000409285 GSPT1P15170 499 aaKnown RBP24.91■■□□□ 1.58
VSX1-203ENST00000409285 PI16Q6UXB8 463 aa24.91■■□□□ 1.58
VSX1-203ENST00000409285 IQSEC3Q9UPP2 1182 aaPredicted RBP24.91■■□□□ 1.58
VSX1-203ENST00000409285 MYH2Q9UKX2 1941 aa24.91■■□□□ 1.58
VSX1-203ENST00000409285 YDJCA8MPS7 323 aa24.9■■□□□ 1.58
VSX1-203ENST00000409285 TICAM2Q86XR7 235 aa24.9■■□□□ 1.58
VSX1-203ENST00000409285 WDR66Q8TBY9 1149 aa24.9■■□□□ 1.58
VSX1-203ENST00000409285 PAG1Q9NWQ8 432 aa24.9■■□□□ 1.58
VSX1-203ENST00000409285 ZAP70P43403 619 aa24.89■■□□□ 1.58
VSX1-203ENST00000409285 FKBP1AP62942 108 aaKnown RBP24.89■■□□□ 1.58
VSX1-203ENST00000409285 TTF1Q15361 905 aaPredicted RBP24.89■■□□□ 1.58
VSX1-203ENST00000409285 STRIP1Q5VSL9 837 aa24.89■■□□□ 1.58
VSX1-203ENST00000409285 TBC1D22AQ8WUA7 517 aa24.89■■□□□ 1.58
VSX1-203ENST00000409285 RFX7Q2KHR2 1363 aa24.89■■□□□ 1.57
VSX1-203ENST00000409285 FZD9O00144 591 aa24.89■■□□□ 1.57
VSX1-203ENST00000409285 CYP2E1P05181 493 aaPredicted RBP24.89■■□□□ 1.57
VSX1-203ENST00000409285 ZGPATQ8N5A5 531 aaKnown RBP24.89■■□□□ 1.57
VSX1-203ENST00000409285 DNAJC2Q99543 621 aaKnown RBP24.89■■□□□ 1.57
VSX1-203ENST00000409285 ZC3H4Q9UPT8 1303 aaKnown RBP24.88■■□□□ 1.57
VSX1-203ENST00000409285 EVI5LQ96CN4 794 aa24.88■■□□□ 1.57
VSX1-203ENST00000409285 SNRKQ9NRH2 765 aa24.88■■□□□ 1.57
VSX1-203ENST00000409285 USP17L3A6NCW0 530 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 USP17L4A6NCW7 530 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 TTLL5Q6EMB2 1281 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 USP17L1Q7RTZ2 530 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 CNTROBQ8N137 903 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 NDUFB9Q9Y6M9 179 aa24.87■■□□□ 1.57
VSX1-203ENST00000409285 GOLIM4O00461 696 aa24.86■■□□□ 1.57
VSX1-203ENST00000409285 GTF2IP78347 998 aa24.86■■□□□ 1.57
VSX1-203ENST00000409285 SUGT1Q9Y2Z0 365 aa24.86■■□□□ 1.57
VSX1-203ENST00000409285 SDSP20132 328 aa24.85■■□□□ 1.57
VSX1-203ENST00000409285 YY1P25490 414 aa24.85■■□□□ 1.57
VSX1-203ENST00000409285 DACT2Q5SW24 774 aa24.85■■□□□ 1.57
VSX1-203ENST00000409285 TMED8Q6PL24 325 aaPredicted RBP24.85■■□□□ 1.57
VSX1-203ENST00000409285 KBTBD3Q8NAB2 608 aa24.85■■□□□ 1.57
VSX1-203ENST00000409285 MYO3BQ8WXR4 1341 aa24.85■■□□□ 1.57
VSX1-203ENST00000409285 ECM29Q5VYK3 1845 aa24.84■■□□□ 1.57
VSX1-203ENST00000409285 CHAF1AQ13111 956 aaPredicted RBP24.84■■□□□ 1.57
VSX1-203ENST00000409285 EDC3Q96F86 508 aaKnown RBP24.84■■□□□ 1.57
VSX1-203ENST00000409285 ANTXR1Q9H6X2 564 aa24.84■■□□□ 1.57
VSX1-203ENST00000409285 KCNQ5Q9NR82 932 aa24.84■■□□□ 1.57
VSX1-203ENST00000409285 TRIM6-TRIM34B2RNG4 842 aa24.83■■□□□ 1.57
VSX1-203ENST00000409285 MFSD14BQ5SR56 506 aa24.83■■□□□ 1.57
VSX1-203ENST00000409285 RNF181Q9P0P0 153 aa24.83■■□□□ 1.57
VSX1-203ENST00000409285 VIL1P09327 827 aaKnown RBP24.83■■□□□ 1.56
VSX1-203ENST00000409285 CXCL9Q07325 125 aa24.83■■□□□ 1.56
VSX1-203ENST00000409285 SPTY2D1Q68D10 685 aaPredicted RBP24.83■■□□□ 1.56
VSX1-203ENST00000409285 PIH1D3Q9NQM4 214 aaKnown RBP24.83■■□□□ 1.56
VSX1-203ENST00000409285 ADAMTSL1Q8N6G6 1762 aa24.82■■□□□ 1.56
VSX1-203ENST00000409285 MAP4K4O95819 1239 aaPredicted RBP24.82■■□□□ 1.56
VSX1-203ENST00000409285 TNIP1Q15025 636 aa24.82■■□□□ 1.56
VSX1-203ENST00000409285 C9orf131Q5VYM1 1079 aa24.82■■□□□ 1.56
VSX1-203ENST00000409285 CIAPIN1Q6FI81 312 aa24.82■■□□□ 1.56
VSX1-203ENST00000409285 CDK5RAP2Q96SN8 1893 aa24.82■■□□□ 1.56
VSX1-203ENST00000409285 EIF6P56537 245 aaKnown RBP24.81■■□□□ 1.56
VSX1-203ENST00000409285 TBC1D9Q6ZT07 1266 aa24.81■■□□□ 1.56
VSX1-203ENST00000409285 CERS5Q8N5B7 392 aa24.81■■□□□ 1.56
VSX1-203ENST00000409285 JAG2Q9Y219 1238 aa24.81■■□□□ 1.56
VSX1-203ENST00000409285 FOCADQ5VW36 1801 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 PSMD14O00487 310 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 RAD17O75943 681 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 MAP3K12Q12852 859 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 LRRFIP1Q32MZ4 808 aaKnown RBP24.8■■□□□ 1.56
VSX1-203ENST00000409285 RSBN1LQ6PCB5 846 aaPredicted RBP24.8■■□□□ 1.56
VSX1-203ENST00000409285 RILPL2Q969X0 211 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 FSD1Q9BTV5 496 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.8■■□□□ 1.56
VSX1-203ENST00000409285 ABCF2Q9UG63 623 aa24.8■■□□□ 1.56
VSX1-203ENST00000409285 PRDX5P30044 214 aa24.79■■□□□ 1.56
VSX1-203ENST00000409285 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
VSX1-203ENST00000409285 LRP2BPQ9P2M1 347 aa24.79■■□□□ 1.56
VSX1-203ENST00000409285 SCN4AP35499 1836 aa24.79■■□□□ 1.56
VSX1-203ENST00000409285 LDHBP07195 334 aaKnown RBP24.78■■□□□ 1.56
VSX1-203ENST00000409285 ZFYP08048 801 aaPredicted RBP24.78■■□□□ 1.56
VSX1-203ENST00000409285 AGBL3Q8NEM8 1001 aa24.78■■□□□ 1.56
VSX1-203ENST00000409285 FBXW7Q969H0 707 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms