RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 NPAS3Q8IXF0 933 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 STK35Q8TDR2 534 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 JPH1Q9HDC5 661 aaPredicted RBP4.38□□□□□ -1.71
CUL3-203ENST00000409096 SOX13Q9UN79 622 aa4.38□□□□□ -1.71
CUL3-203ENST00000409096 SHISA8B8ZZ34 492 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 MAP2K3P46734 347 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 MPRIPQ6WCQ1 1025 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 SLCO4C1Q6ZQN7 724 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 MICALL1Q8N3F8 863 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 BSNDQ8WZ55 320 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 NECAB3Q96P71 396 aaPredicted RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 RBSNQ9H1K0 784 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 PPP4R2Q9NY27 417 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 PPP1R1BQ9UD71 204 aaPredicted RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 ADAMTS1Q9UHI8 967 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 ITGAEP38570 1179 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 SRSF11Q05519 484 aaKnown RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 C20orf204Q6ZNR8 217 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 C8orf37Q96NL8 207 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 CLEC4MQ9H2X3 399 aaPredicted RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 PPM1HQ9ULR3 514 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 GBP2P32456 591 aaPredicted RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 GALNT6Q8NCL4 622 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 WHAMMQ8TF30 809 aa4.37□□□□□ -1.71
CUL3-203ENST00000409096 NOC4LQ9BVI4 516 aaKnown RBP4.37□□□□□ -1.71
CUL3-203ENST00000409096 LOC105371045A0A1W2PR82 267 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 M0R082 166 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 RGS9O75916 674 aaPredicted RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 ECEL1O95672 775 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 XRCC5P13010 732 aaKnown RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 DNAJA1P31689 397 aaKnown RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 GMPRP36959 345 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 BAG6P46379 1132 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 AFF1P51825 1210 aaKnown RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 PCDH1Q08174 1060 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 PAK2Q13177 524 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 PCSK7Q16549 785 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 GOLGA6L1Q8N7Z2 621 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 ZNF417Q8TAU3 575 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 SLC7A3Q8WY07 619 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 ZNF587Q96SQ5 575 aaPredicted RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 ESRRAP11474 423 aaPredicted RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 LIG3P49916 1009 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 PCNX4Q63HM2 1172 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 TTBK2Q6IQ55 1244 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 FBXL19Q6PCT2 694 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 PHC3Q8NDX5 983 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 GRIN3AQ8TCU5 1115 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 IRF7Q92985 503 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 RHOVQ96L33 236 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 NSFL1CQ9UNZ2 370 aaKnown RBP4.36□□□□□ -1.71
CUL3-203ENST00000409096 INPP5FQ9Y2H2 1132 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 PCDHB5Q9Y5E4 795 aa4.36□□□□□ -1.71
CUL3-203ENST00000409096 SOX1O00570 391 aaPredicted RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 B3GALT4O96024 378 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 PTPRAP18433 802 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 TFE3P19532 575 aaPredicted RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 CRKP46108 304 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 EDARADDQ8WWZ3 215 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 TMEM74Q96NL1 305 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 CARD10Q9BWT7 1032 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 FRRS1LQ9P0K9 344 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 GDF2Q9UK05 429 aaPredicted RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 LINC01387J3KSC0 135 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 PF4P02776 101 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 LYPD4Q6UWN0 246 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 ZNF654Q8IZM8 581 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 IL22RA1Q8N6P7 574 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 ANKRD24Q8TF21 1146 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 SLC16A10Q8TF71 515 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 SREK1Q8WXA9 508 aaKnown RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 ZC3H12CQ9C0D7 883 aaKnown RBP4.35□□□□□ -1.71
CUL3-203ENST00000409096 ADAM19Q9H013 955 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 TMEM39AQ9NV64 488 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 UBP1Q9NZI7 540 aa4.35□□□□□ -1.71
CUL3-203ENST00000409096 GARTP22102 1010 aa4.34□□□□□ -1.71
CUL3-203ENST00000409096 EIF4A3P38919 411 aaKnown RBP4.34□□□□□ -1.71
CUL3-203ENST00000409096 PTPN11Q06124 597 aaPredicted RBP4.34□□□□□ -1.71
CUL3-203ENST00000409096 SEPT6Q14141 434 aa4.34□□□□□ -1.71
CUL3-203ENST00000409096 BNC2Q6ZN30 1099 aaPredicted RBP4.34□□□□□ -1.71
CUL3-203ENST00000409096 EAF1Q96JC9 268 aaPredicted RBP4.34□□□□□ -1.71
CUL3-203ENST00000409096 RSRP1Q9BUV0 290 aa4.34□□□□□ -1.71
CUL3-203ENST00000409096 OIP5O43482 229 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 BMP6P22004 513 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 ALAS2P22557 587 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 CDC27P30260 824 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 COL9A3Q14050 684 aaPredicted RBP4.34□□□□□ -1.72
CUL3-203ENST00000409096 IKBKEQ14164 716 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 SV2BQ7L1I2 683 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 GOLM1Q8NBJ4 401 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 FBXO27Q8NI29 283 aa4.34□□□□□ -1.72
CUL3-203ENST00000409096 ZNF296Q8WUU4 475 aaPredicted RBP4.34□□□□□ -1.72
CUL3-203ENST00000409096 ZNF775Q96BV0 537 aaPredicted RBP4.34□□□□□ -1.72
CUL3-203ENST00000409096 CTSBP07858 339 aa4.33□□□□□ -1.72
CUL3-203ENST00000409096 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
CUL3-203ENST00000409096 GJA8P48165 433 aa4.33□□□□□ -1.72
CUL3-203ENST00000409096 CAMK2GQ13555 558 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms