RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 POLA2Q14181 598 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 TBC1D10BQ4KMP7 808 aaPredicted RBP15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 SLC10A5Q5PT55 438 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 ERC1Q8IUD2 1116 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 GBP4Q96PP9 640 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 SAGE1Q9NXZ1 904 aa15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
SMARCB1-203ENST00000407082 FAM155AB1AL88 458 aaPredicted RBP15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 APBB1O00213 710 aa15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 GRM8O00222 908 aa15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 IRS4O14654 1257 aaPredicted RBP15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 MCM2P49736 904 aa15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 CTU1Q7Z7A3 348 aaKnown RBP15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
SMARCB1-203ENST00000407082 ADM5C9JUS6 153 aa15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 SP8Q8IXZ3 490 aa15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 RTFDC1Q9BY42 306 aaPredicted RBP15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
SMARCB1-203ENST00000407082 RIC1Q4ADV7 1423 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 BBOX1O75936 387 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 NBPF7P0C2Y1 421 aaPredicted RBP15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 MCM4P33991 863 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 CASP7P55210 303 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 MTX1Q13505 466 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 CSRNP1Q96S65 589 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 CWC22Q9HCG8 908 aaKnown RBP15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 HDAC9Q9UKV0 1011 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 HPS5Q9UPZ3 1129 aa15.6■□□□□ 0.09
SMARCB1-203ENST00000407082 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 YDJCA8MPS7 323 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 PDE8AO60658 829 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 SURF6O75683 361 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 ANAPC15P60006 121 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 SKOR2Q2VWA4 1001 aaPredicted RBP15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 L1TD1Q5T7N2 865 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 KIF2CQ99661 725 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 UTYO14607 1347 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 SALL3Q9BXA9 1300 aa15.59■□□□□ 0.09
SMARCB1-203ENST00000407082 GOLGA6L22H0YM25 854 aa15.58■□□□□ 0.08
SMARCB1-203ENST00000407082 RIMBP2O15034 1052 aa15.58■□□□□ 0.08
SMARCB1-203ENST00000407082 DDX46Q7L014 1031 aaKnown RBP15.58■□□□□ 0.08
SMARCB1-203ENST00000407082 TRIM6-TRIM34B2RNG4 842 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 PSMD14O00487 310 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 EGFRP00533 1210 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 NUCB2P80303 420 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 OTUD7AQ8TE49 926 aaPredicted RBP15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 DBNDD1Q9H9R9 158 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 TTC41PQ6P2S7 1318 aa15.57■□□□□ 0.08
SMARCB1-203ENST00000407082 DDIT3P35638 169 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 WASHC4Q2M389 1173 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 SULF1Q8IWU6 871 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 RHPN1Q8TCX5 695 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 DPF2Q92785 391 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 SUCLG2Q96I99 432 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 ESYT1Q9BSJ8 1104 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 PLA2G12BQ9BX93 195 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 AKAP11Q9UKA4 1901 aa15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 POLR2AP24928 1970 aaKnown RBP15.56■□□□□ 0.08
SMARCB1-203ENST00000407082 AK9Q5TCS8 1911 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 C6orf229H3BNL8 230 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 SLC10A3P09131 477 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 CTSWP56202 376 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 FOXO4P98177 505 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 SF3B3Q15393 1217 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 CCDC152Q4G0S7 254 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 RILPL2Q969X0 211 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 ISY1Q9ULR0 285 aaKnown RBP15.55■□□□□ 0.08
SMARCB1-203ENST00000407082 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 GRAPQ13588 217 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 RAB3GAP1Q15042 981 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 DOK7Q18PE1 504 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 EPHA10Q5JZY3 1008 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 GRAPLQ8TC17 118 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 KCNQ5Q9NR82 932 aa15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 NSFL1CQ9UNZ2 370 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 DDX60Q8IY21 1712 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-203ENST00000407082 GLRX3O76003 335 aaKnown RBP15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 CSF1RP07333 972 aa15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 CHMLP26374 656 aa15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 PKN2Q16513 984 aaKnown RBP15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 KIF4BQ2VIQ3 1234 aa15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 LMBR1LQ6UX01 489 aa15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 CDCA5Q96FF9 252 aa15.53■□□□□ 0.08
SMARCB1-203ENST00000407082 GGA3Q9NZ52 723 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms