RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MCF2L2Q86YR7 1114 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 CKAP2LQ8IYA6 745 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 GTPBP3Q969Y2 492 aaKnown RBP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 PBX4Q9BYU1 374 aa7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 AVENQ9NQS1 362 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P18-201ENST00000406327 A0A096LPE4 126 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 A0A1W2PPZ6 126 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 COL13A1Q5TAT6 717 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 NXPE3Q969Y0 559 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 NT5C1AQ9BXI3 368 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 LNPKQ9C0E8 428 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 KCNQ5Q9NR82 932 aa7.11□□□□□ -1.27
HMGB3P18-201ENST00000406327 MINDY4BA8MYZ0 360 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 SMARCA5O60264 1052 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 EIF4EBP3O60516 100 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 SIN3BO75182 1162 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 FBXO24O75426 580 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 HSP90B1P14625 803 aaKnown RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 EIF2AK2P19525 551 aaKnown RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 GRIA4P48058 902 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 SNAP47Q5SQN1 464 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ZNF468Q5VIY5 522 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 MICALL1Q8N3F8 863 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 PHC3Q8NDX5 983 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 DDX54Q8TDD1 881 aaKnown RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ASAP3Q8TDY4 903 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ZNF296Q8WUU4 475 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 RHOVQ96L33 236 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 NECAB3Q96P71 396 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 PUS7Q96PZ0 661 aaKnown RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ZNF576Q9H609 170 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ADAMTS1Q9UHI8 967 aa7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 GPN3Q9UHW5 284 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
HMGB3P18-201ENST00000406327 ROBO2Q9HCK4 1378 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 MSTNO14793 375 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 MAP3K10Q02779 954 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 LMNB2Q03252 620 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 MAP3K11Q16584 847 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 TTBK2Q6IQ55 1244 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 CCDC84Q86UT8 332 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 BSNDQ8WZ55 320 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 TMEM39AQ9NV64 488 aa7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 NSFL1CQ9UNZ2 370 aaKnown RBP7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P18-201ENST00000406327 NFKBIEO00221 500 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 CELA3AP09093 270 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 BMP4P12644 408 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 ACPPP15309 386 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 PTPRAP18433 802 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 LRRC14Q15048 493 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 NFE2L2Q16236 605 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 AGMOQ6ZNB7 445 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 SV2AQ7L0J3 742 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 SYT9Q86SS6 491 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 CACTIN-AS1Q8N1I8 211 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 PMFBP1Q8TBY8 1022 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 TRIM56Q9BRZ2 755 aaKnown RBP7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 OSBPL2Q9H1P3 480 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 RASSF4Q9H2L5 321 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 DNAJB12Q9NXW2 375 aaKnown RBP7.08□□□□□ -1.28
HMGB3P18-201ENST00000406327 CDC14CA4D256 554 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 ENC1O14682 589 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 SOX9P48436 509 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 NASPP49321 788 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 TBC1D8BQ0IIM8 1120 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 APOBRQ0VD83 1088 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 CAMK2GQ13555 558 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 SPRED3Q2MJR0 410 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 TNFRSF25Q93038 417 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 IGFLR1Q9H665 355 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 EFR3BQ9Y2G0 817 aa7.07□□□□□ -1.28
HMGB3P18-201ENST00000406327 METTL12A8MUP2 240 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 GREM1O60565 184 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 PF4P02776 101 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 CABP4P57796 275 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 MLLT1Q03111 559 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 PLA2G4EQ3MJ16 856 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 PCNX4Q63HM2 1172 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 SCARA3Q6AZY7 606 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 FBXL19Q6PCT2 694 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 TRIM42Q8IWZ5 723 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 VWA5B2Q8N398 1253 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 GOLM1Q8NBJ4 401 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 CPLX3Q8WVH0 158 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 EMILIN2Q9BXX0 1053 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 MIR1-1HGQ9H1L0 117 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 ZSWIM4Q9H7M6 989 aa7.06□□□□□ -1.28
HMGB3P18-201ENST00000406327 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms