RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 TNS4Q8IZW8 715 aa9.5□□□□□ -0.89
CEACAM1-208ENST00000403461 TMC1Q8TDI8 760 aa9.5□□□□□ -0.89
CEACAM1-208ENST00000403461 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
CEACAM1-208ENST00000403461 HINFPQ9BQA5 517 aa9.5□□□□□ -0.89
CEACAM1-208ENST00000403461 QRICH2Q9H0J4 1663 aa9.5□□□□□ -0.89
CEACAM1-208ENST00000403461 TMEM88BA6NKF7 163 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 CDK2AP1O14519 115 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 HMGB2P26583 209 aaKnown RBP9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 RNF217Q8TC41 542 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 CASZ1Q86V15 1759 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 USP31Q70CQ4 1352 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 TRPM1Q7Z4N2 1603 aa9.49□□□□□ -0.89
CEACAM1-208ENST00000403461 PIK3C2AO00443 1686 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 MYOM1P52179 1685 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 NFAT5O94916 1531 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 ZNF827Q17R98 1081 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 NME9Q86XW9 330 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 DDX54Q8TDD1 881 aaKnown RBP9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
CEACAM1-208ENST00000403461 MAN1A2O60476 641 aa9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 FOXK2Q01167 660 aa9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 TMEM214Q6NUQ4 689 aaKnown RBP9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 CLP1Q92989 425 aaKnown RBP9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
CEACAM1-208ENST00000403461 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 SPATA31C2B4DYI2 1134 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 NEUROD1Q13562 356 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 LRRC4BQ9NT99 713 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 SBNO2Q9Y2G9 1366 aa9.46□□□□□ -0.9
CEACAM1-208ENST00000403461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.91e-6■□□□□ 9.6
CEACAM1-208ENST00000403461 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 PRICKLE2Q7Z3G6 844 aa9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 LTV1Q96GA3 475 aaPredicted RBP9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 TSPAN10Q9H1Z9 355 aaPredicted RBP9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 EDC4Q6P2E9 1401 aaKnown RBP9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 COL18A1P39060 1754 aa9.45□□□□□ -0.9
CEACAM1-208ENST00000403461 WEE1P30291 646 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 AMPHP49418 695 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 RHBDD1Q8TEB9 315 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 IP6K1Q92551 441 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 CCNL1Q9UK58 526 aaPredicted RBP9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 ANKRD36BQ8N2N9 1353 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 NHSQ6T4R5 1651 aa9.44□□□□□ -0.9
CEACAM1-208ENST00000403461 CARNS1A5YM72 827 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 LGR5O75473 907 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 IGFBP4P22692 258 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 POU4F2Q12837 409 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 ZNF295-AS1Q8N0V1 137 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 COG3Q96JB2 828 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 PUS7Q96PZ0 661 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 NIFKQ9BYG3 293 aaKnown RBP9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
CEACAM1-208ENST00000403461 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 USP47Q96K76 1375 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 C21orf2O43822 256 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 PRMT3O60678 531 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 OCLNQ16625 522 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 TBCELQ5QJ74 424 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 NBPF10Q6P3W6 841 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 ZCRB1Q8TBF4 217 aaKnown RBP9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 PRIMPOLQ96LW4 560 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 WNK3Q9BYP7 1800 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 PAPPAQ13219 1627 aa9.42□□□□□ -0.9
CEACAM1-208ENST00000403461 UTRNP46939 3433 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 SMG6Q86US8 1419 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 A0A1W2PP64 1363 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 CGNL1Q0VF96 1302 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 PSMA6P60900 246 aaKnown RBP9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 TEAD4Q15561 434 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 C4orf17Q53FE4 359 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 STAG2Q8N3U4 1231 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 NLGN2Q8NFZ4 835 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 RAPGEF4Q8WZA2 1011 aa9.41□□□□□ -0.9
CEACAM1-208ENST00000403461 MAP3K19Q56UN5 1328 aa9.4□□□□□ -0.9
CEACAM1-208ENST00000403461 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
CEACAM1-208ENST00000403461 KCNQ4P56696 695 aa9.4□□□□□ -0.9
CEACAM1-208ENST00000403461 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
CEACAM1-208ENST00000403461 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms