RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.61
PDGFA-203ENST00000402802 SNAP23O00161 211 aa18.83■□□□□ 0.61
PDGFA-203ENST00000402802 RFC4P35249 363 aa18.83■□□□□ 0.61
PDGFA-203ENST00000402802 KRT222Q8N1A0 295 aa18.83■□□□□ 0.61
PDGFA-203ENST00000402802 ABCC12Q96J65 1359 aa18.83■□□□□ 0.6
PDGFA-203ENST00000402802 DDX60Q8IY21 1712 aaKnown RBP18.83■□□□□ 0.6
PDGFA-203ENST00000402802 SCN7AQ01118 1682 aa18.83■□□□□ 0.6
PDGFA-203ENST00000402802 SPC24Q8NBT2 197 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 CNPY2Q9Y2B0 182 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 ATP5JP18859 108 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 TXNRD1Q16881 649 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 FAM227BQ96M60 508 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
PDGFA-203ENST00000402802 DDX46Q7L014 1031 aaKnown RBP18.81■□□□□ 0.6
PDGFA-203ENST00000402802 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
PDGFA-203ENST00000402802 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
PDGFA-203ENST00000402802 APBA3O96018 575 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 XAGE2Q96GT9 111 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 CALCOCO1Q9P1Z2 691 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 PALD1Q9ULE6 856 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 SGSM2O43147 1006 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 ZSCAN22P10073 491 aaPredicted RBP18.8■□□□□ 0.6
PDGFA-203ENST00000402802 SLFNL1Q499Z3 407 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 NBPF5PQ86XG9 351 aaPredicted RBP18.8■□□□□ 0.6
PDGFA-203ENST00000402802 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 GPR108Q9NPR9 543 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 FAM53CQ9NYF3 392 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
PDGFA-203ENST00000402802 TAF5LO75529 589 aa18.79■□□□□ 0.6
PDGFA-203ENST00000402802 PTGS1P23219 599 aa18.79■□□□□ 0.6
PDGFA-203ENST00000402802 CCDC152Q4G0S7 254 aa18.79■□□□□ 0.6
PDGFA-203ENST00000402802 GIMAP6Q6P9H5 292 aa18.79■□□□□ 0.6
PDGFA-203ENST00000402802 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
PDGFA-203ENST00000402802 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
PDGFA-203ENST00000402802 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
PDGFA-203ENST00000402802 TULP2O00295 520 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 TNNT1P13805 278 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 VGLL2Q8N8G2 317 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 ZNF397Q8NF99 534 aaPredicted RBP18.78■□□□□ 0.6
PDGFA-203ENST00000402802 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 GOLIM4O00461 696 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 CCDC192P0DO97 292 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 SCARF1Q14162 830 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 PI16Q6UXB8 463 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 FBXO3Q9UK99 471 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 TAF1P21675 1872 aa18.78■□□□□ 0.6
PDGFA-203ENST00000402802 NFIXQ14938 502 aa18.77■□□□□ 0.6
PDGFA-203ENST00000402802 SLC27A3Q5K4L6 730 aa18.77■□□□□ 0.6
PDGFA-203ENST00000402802 GORABQ5T7V8 394 aa18.77■□□□□ 0.6
PDGFA-203ENST00000402802 C16orf45Q96MC5 204 aaPredicted RBP18.77■□□□□ 0.6
PDGFA-203ENST00000402802 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.6
PDGFA-203ENST00000402802 HAUS7Q99871 368 aa18.77■□□□□ 0.6
PDGFA-203ENST00000402802 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
PDGFA-203ENST00000402802 IFIT1P09914 478 aaKnown RBP18.76■□□□□ 0.59
PDGFA-203ENST00000402802 ZNF827Q17R98 1081 aa18.76■□□□□ 0.59
PDGFA-203ENST00000402802 PLCD3Q8N3E9 789 aa18.76■□□□□ 0.59
PDGFA-203ENST00000402802 FAM200AQ8TCP9 573 aa18.76■□□□□ 0.59
PDGFA-203ENST00000402802 AKAP2Q9Y2D5 859 aa18.76■□□□□ 0.59
PDGFA-203ENST00000402802 SPEF2Q9C093 1822 aa18.76■□□□□ 0.59
PDGFA-203ENST00000402802 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
PDGFA-203ENST00000402802 NPHP1O15259 732 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 PDE8BO95263 885 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 PTH1RQ03431 593 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 TTC39AQ5SRH9 613 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
PDGFA-203ENST00000402802 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 FKBP4Q02790 459 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDGFA-203ENST00000402802 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
PDGFA-203ENST00000402802 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
PDGFA-203ENST00000402802 GYS1P13807 737 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 NAA30Q147X3 362 aaPredicted RBP18.74■□□□□ 0.59
PDGFA-203ENST00000402802 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
PDGFA-203ENST00000402802 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
PDGFA-203ENST00000402802 TSPYL1Q9H0U9 437 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 STX6O43752 255 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 LRP5O75197 1615 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 F13A1P00488 732 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 IGHMBP2P38935 993 aaKnown RBP18.74■□□□□ 0.59
PDGFA-203ENST00000402802 CCDC186Q7Z3E2 898 aa18.74■□□□□ 0.59
PDGFA-203ENST00000402802 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
PDGFA-203ENST00000402802 LAMB2P55268 1798 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 TPTE2Q6XPS3 522 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 CCDC129Q6ZRS4 1044 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.73■□□□□ 0.59
PDGFA-203ENST00000402802 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
PDGFA-203ENST00000402802 FIBPO43427 364 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 FBXO41Q8TF61 875 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
PDGFA-203ENST00000402802 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
PDGFA-203ENST00000402802 ZSCAN25Q6NSZ9 544 aa18.72■□□□□ 0.59
PDGFA-203ENST00000402802 COL24A1Q17RW2 1714 aa18.72■□□□□ 0.59
PDGFA-203ENST00000402802 SYT1P21579 422 aa18.72■□□□□ 0.59
PDGFA-203ENST00000402802 ZAP70P43403 619 aa18.72■□□□□ 0.59
PDGFA-203ENST00000402802 PHKA1P46020 1223 aa18.72■□□□□ 0.59
PDGFA-203ENST00000402802 CHRNDQ07001 517 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms