RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TFCP2Q12800 502 aa23.8■■□□□ 1.4
RTN4-207ENST00000402434 G3BP1Q13283 466 aaKnown RBP eCLIP23.8■■□□□ 1.43e-16■□□□□ 9.4
RTN4-207ENST00000402434 OGFOD1Q8N543 542 aa23.8■■□□□ 1.4
RTN4-207ENST00000402434 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
RTN4-207ENST00000402434 KIF4BQ2VIQ3 1234 aa23.79■■□□□ 1.4
RTN4-207ENST00000402434 AKAP2Q9Y2D5 859 aa23.79■■□□□ 1.4
RTN4-207ENST00000402434 RBM26Q5T8P6 1007 aaKnown RBP23.78■■□□□ 1.4
RTN4-207ENST00000402434 MYOZ2Q9NPC6 264 aa23.78■■□□□ 1.4
RTN4-207ENST00000402434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.78■■□□□ 1.4
RTN4-207ENST00000402434 RRP1P56182 461 aaKnown RBP23.77■■□□□ 1.4
RTN4-207ENST00000402434 KIAA0825Q8IV33 1275 aa23.77■■□□□ 1.4
RTN4-207ENST00000402434 RPAP2Q8IXW5 612 aaPredicted RBP23.77■■□□□ 1.4
RTN4-207ENST00000402434 SURF6O75683 361 aaKnown RBP23.76■■□□□ 1.39
RTN4-207ENST00000402434 TIMM10P62072 90 aa23.76■■□□□ 1.39
RTN4-207ENST00000402434 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
RTN4-207ENST00000402434 JAG2Q9Y219 1238 aa23.76■■□□□ 1.39
RTN4-207ENST00000402434 ZBTB22O15209 634 aa23.75■■□□□ 1.39
RTN4-207ENST00000402434 MFSD14BQ5SR56 506 aa23.75■■□□□ 1.39
RTN4-207ENST00000402434 A0A1B0GUL7 405 aa23.75■■□□□ 1.39
RTN4-207ENST00000402434 FRAT2O75474 233 aaPredicted RBP23.74■■□□□ 1.39
RTN4-207ENST00000402434 ADORA1P30542 326 aa23.74■■□□□ 1.39
RTN4-207ENST00000402434 SIRT2Q8IXJ6 389 aa23.74■■□□□ 1.39
RTN4-207ENST00000402434 HDAC9Q9UKV0 1011 aa23.74■■□□□ 1.39
RTN4-207ENST00000402434 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
RTN4-207ENST00000402434 SCARF1Q14162 830 aa23.73■■□□□ 1.39
RTN4-207ENST00000402434 CDC37L1Q7L3B6 337 aa23.73■■□□□ 1.39
RTN4-207ENST00000402434 TBC1D22AQ8WUA7 517 aa23.73■■□□□ 1.39
RTN4-207ENST00000402434 GPR108Q9NPR9 543 aa23.73■■□□□ 1.39
RTN4-207ENST00000402434 PHKA1P46020 1223 aa23.72■■□□□ 1.39
RTN4-207ENST00000402434 CCDC102BQ68D86 513 aa23.72■■□□□ 1.39
RTN4-207ENST00000402434 XAGE2Q96GT9 111 aa23.72■■□□□ 1.39
RTN4-207ENST00000402434 ZBED3Q96IU2 234 aaPredicted RBP23.72■■□□□ 1.39
RTN4-207ENST00000402434 GLIS2Q9BZE0 524 aaPredicted RBP23.72■■□□□ 1.39
RTN4-207ENST00000402434 GNL3LQ9NVN8 582 aaKnown RBP23.72■■□□□ 1.39
RTN4-207ENST00000402434 WNT10BO00744 389 aa23.71■■□□□ 1.39
RTN4-207ENST00000402434 OS9Q13438 667 aaPredicted RBP23.71■■□□□ 1.39
RTN4-207ENST00000402434 MTMR14Q8NCE2 650 aa23.71■■□□□ 1.39
RTN4-207ENST00000402434 DCPSQ96C86 337 aaKnown RBP23.71■■□□□ 1.39
RTN4-207ENST00000402434 ARAP2Q8WZ64 1704 aa23.71■■□□□ 1.39
RTN4-207ENST00000402434 ASTN2O75129 1339 aaPredicted RBP23.71■■□□□ 1.39
RTN4-207ENST00000402434 POLR2AP24928 1970 aaKnown RBP23.71■■□□□ 1.39
RTN4-207ENST00000402434 TRAF5O00463 557 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 SEMA3EO15041 775 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 HMMRO75330 724 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 CHAF1AQ13111 956 aaPredicted RBP23.7■■□□□ 1.38
RTN4-207ENST00000402434 NBPF9Q3BBW0 867 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 CREBZFQ9NS37 354 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 GGA3Q9NZ52 723 aa23.7■■□□□ 1.38
RTN4-207ENST00000402434 F8W031 263 aaPredicted RBP23.69■■□□□ 1.38
RTN4-207ENST00000402434 HTRA3P83110 453 aa23.69■■□□□ 1.38
RTN4-207ENST00000402434 KRT26Q7Z3Y9 468 aa23.69■■□□□ 1.38
RTN4-207ENST00000402434 WDR66Q8TBY9 1149 aa23.69■■□□□ 1.38
RTN4-207ENST00000402434 NEUROD6Q96NK8 337 aa23.69■■□□□ 1.38
RTN4-207ENST00000402434 PITPNM2Q9BZ72 1349 aa23.69■■□□□ 1.38
RTN4-207ENST00000402434 FMR1Q06787 632 aaKnown RBP eCLIP23.68■■□□□ 1.385e-11■□□□□ 8.4
RTN4-207ENST00000402434 TNNI3KQ59H18 835 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 ANGEL2Q5VTE6 544 aaKnown RBP23.68■■□□□ 1.38
RTN4-207ENST00000402434 DNAJC5GQ8N7S2 189 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 EXOC6BQ9Y2D4 811 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 SUGT1Q9Y2Z0 365 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 FPGT-TNNI3KV9GXZ4 949 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 COL1A1P02452 1464 aaPredicted RBP23.68■■□□□ 1.38
RTN4-207ENST00000402434 TMEM88BA6NKF7 163 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 GRIK5Q16478 980 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 HSP90AB4PQ58FF6 505 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 USP48Q86UV5 1035 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 ERC1Q8IUD2 1116 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 DENND2AQ9ULE3 1009 aa23.68■■□□□ 1.38
RTN4-207ENST00000402434 TTF2Q9UNY4 1162 aaKnown RBP23.68■■□□□ 1.38
RTN4-207ENST00000402434 DLGAP5Q15398 846 aa23.67■■□□□ 1.38
RTN4-207ENST00000402434 SERPINA10Q9UK55 444 aa23.67■■□□□ 1.38
RTN4-207ENST00000402434 HDLBPQ00341 1268 aaKnown RBP23.66■■□□□ 1.38
RTN4-207ENST00000402434 RASGRF1Q13972 1273 aa23.66■■□□□ 1.38
RTN4-207ENST00000402434 CST9Q5W186 159 aa23.66■■□□□ 1.38
RTN4-207ENST00000402434 SULF1Q8IWU6 871 aa23.66■■□□□ 1.38
RTN4-207ENST00000402434 MRIQ9BWK5 157 aa23.66■■□□□ 1.38
RTN4-207ENST00000402434 PDS5AQ29RF7 1337 aaKnown RBP23.66■■□□□ 1.38
RTN4-207ENST00000402434 MYH13Q9UKX3 1938 aa23.65■■□□□ 1.38
RTN4-207ENST00000402434 SPDYE2BA6NHP3 402 aa23.65■■□□□ 1.38
RTN4-207ENST00000402434 SPDYE6P0CI01 402 aa23.65■■□□□ 1.38
RTN4-207ENST00000402434 CFAP100Q494V2 611 aa23.65■■□□□ 1.38
RTN4-207ENST00000402434 SALL1Q9NSC2 1324 aa23.65■■□□□ 1.38
RTN4-207ENST00000402434 GORABQ5T7V8 394 aa23.64■■□□□ 1.38
RTN4-207ENST00000402434 PRMT6Q96LA8 375 aaPredicted RBP23.64■■□□□ 1.38
RTN4-207ENST00000402434 PCDHAC2Q9Y5I4 1007 aa23.64■■□□□ 1.38
RTN4-207ENST00000402434 TRPM7Q96QT4 1865 aa23.64■■□□□ 1.37
RTN4-207ENST00000402434 ADM5C9JUS6 153 aa23.63■■□□□ 1.37
RTN4-207ENST00000402434 ARID4AP29374 1257 aaPredicted RBP23.63■■□□□ 1.37
RTN4-207ENST00000402434 DLK2Q6UY11 383 aa23.63■■□□□ 1.37
RTN4-207ENST00000402434 EAF2Q96CJ1 260 aaPredicted RBP23.63■■□□□ 1.37
RTN4-207ENST00000402434 RHPN1Q8TCX5 695 aa23.62■■□□□ 1.37
RTN4-207ENST00000402434 DBNDD2Q9BQY9 259 aa23.62■■□□□ 1.37
RTN4-207ENST00000402434 RAB11FIP3O75154 756 aa23.62■■□□□ 1.37
RTN4-207ENST00000402434 CELF2O95319 508 aaKnown RBP23.62■■□□□ 1.37
RTN4-207ENST00000402434 CRKP46108 304 aa23.62■■□□□ 1.37
RTN4-207ENST00000402434 MAST3O60307 1309 aa23.61■■□□□ 1.37
RTN4-207ENST00000402434 RBM5P52756 815 aaKnown RBP eCLIP23.61■■□□□ 1.37
RTN4-207ENST00000402434 KIF1BPQ96EK5 621 aa23.61■■□□□ 1.37
RTN4-207ENST00000402434 ZNF512BQ96KM6 892 aaPredicted RBP23.61■■□□□ 1.37
RTN4-207ENST00000402434 CRBNQ96SW2 442 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms