RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 NAA16Q6N069 864 aaPredicted RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 NBPF11Q86T75 865 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 DDX17Q92841 729 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 CHMP4CQ96CF2 233 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 MED23Q9ULK4 1368 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 TMEM232C9JQI7 657 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 PFKFB1P16118 471 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 KLHL10Q6JEL2 608 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 ARGLU1Q9NWB6 273 aaPredicted RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 ADKP55263 362 aaKnown RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 ZNF827Q17R98 1081 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 TRMT44Q8IYL2 757 aaKnown RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 FMR1NBQ8N0W7 255 aaPredicted RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 HAUS7Q99871 368 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 DESI2Q9BSY9 194 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 ZNF446Q9NWS9 450 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 DENND2AQ9ULE3 1009 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.61□□□□□ -0.71
HPS4-203ENST00000402105 M0R2C6 588 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 CDC25BP30305 580 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 TRDNQ13061 729 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 PDIA6Q15084 440 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 ADALQ6DHV7 355 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 SARM1Q6SZW1 724 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 A0A1B0GUL7 405 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 FDPSP14324 419 aaKnown RBP10.61□□□□□ -0.71
HPS4-203ENST00000402105 CABP4P57796 275 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 KCNH5Q8NCM2 988 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 LINC00301Q8NCQ3 95 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
HPS4-203ENST00000402105 IDH1O75874 414 aaKnown RBP10.6□□□□□ -0.71
HPS4-203ENST00000402105 ENGASEQ8NFI3 743 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 SMARCC2Q8TAQ2 1214 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 INCENPQ9NQS7 918 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 FANCLQ9NW38 375 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 ITSN1Q15811 1721 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 KIF28PB7ZC32 967 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 COBLO75128 1261 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 EVCP57679 992 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 CCDC150Q8NCX0 1101 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 CNNM3Q8NE01 707 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 OSBP2Q969R2 916 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 LZTFL1Q9NQ48 299 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 CEP126Q9P2H0 1117 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 TBX22Q9Y458 520 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 CEMIPQ8WUJ3 1361 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 C3P01024 1663 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 ZNF213O14771 459 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 TRIM29Q14134 588 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 MYSM1Q5VVJ2 828 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 CMTR1Q8N1G2 835 aaKnown RBP10.6□□□□□ -0.71
HPS4-203ENST00000402105 LLPHQ9BRT6 129 aaKnown RBP10.6□□□□□ -0.71
HPS4-203ENST00000402105 ALG1Q9BT22 464 aa10.6□□□□□ -0.71
HPS4-203ENST00000402105 MAST3O60307 1309 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 RNF113AO15541 343 aaKnown RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 A1BGP04217 495 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 ADORA1P30542 326 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 USPL1Q5W0Q7 1092 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 TTLL7Q6ZT98 887 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 KCNG4Q8TDN1 519 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 COPRSQ9NQ92 184 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 PUF60Q9UHX1 559 aaKnown RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 FOXN1O15353 648 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 DHX16O60231 1041 aaKnown RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 WDHD1O75717 1129 aaPredicted RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 TATP17735 454 aaPredicted RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 KIF2AO00139 706 aaPredicted RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 FGAP02671 866 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 SNRPA1P09661 255 aaKnown RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 CASQ1P31415 396 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 TNNT3P45378 269 aaPredicted RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 STX17P56962 302 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 NLRP12P59046 1061 aa10.59□□□□□ -0.71
HPS4-203ENST00000402105 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
HPS4-203ENST00000402105 PES1O00541 588 aaKnown RBP10.58□□□□□ -0.72
HPS4-203ENST00000402105 PNMA6AP0CW24 399 aaPredicted RBP10.58□□□□□ -0.72
HPS4-203ENST00000402105 MCM6Q14566 821 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 SYCP1Q15431 976 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 TSGA10IPQ3SY00 556 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 GRAMD1CQ8IYS0 662 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 CCDC57Q2TAC2 916 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 AEBP2Q6ZN18 517 aaPredicted RBP10.58□□□□□ -0.72
HPS4-203ENST00000402105 IRX2Q9BZI1 471 aaPredicted RBP10.58□□□□□ -0.72
HPS4-203ENST00000402105 PXDNLA1KZ92 1463 aa10.58□□□□□ -0.72
HPS4-203ENST00000402105 FBXO18Q8NFZ0 1043 aa10.57□□□□□ -0.72
HPS4-203ENST00000402105 CCDC12Q8WUD4 166 aaPredicted RBP10.57□□□□□ -0.72
HPS4-203ENST00000402105 RTEL1Q9NZ71 1219 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms