RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 SCARF1Q14162 830 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 USPL1Q5W0Q7 1092 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 CEP57L1Q8IYX8 460 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 PUS7LQ9H0K6 701 aaKnown RBP8.96□□□□□ -0.97
HDAC9-201ENST00000401921 GREM2Q9H772 168 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 ABCF2Q9UG63 623 aa8.96□□□□□ -0.97
HDAC9-201ENST00000401921 LRRC37A3O60309 1634 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 TPM4P67936 248 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 TSGA10IPQ3SY00 556 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 NUP133Q8WUM0 1156 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 APPBP2Q92624 585 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 LLPHQ9BRT6 129 aaKnown RBP8.96□□□□□ -0.98
HDAC9-201ENST00000401921 NAT10Q9H0A0 1025 aaKnown RBP8.96□□□□□ -0.98
HDAC9-201ENST00000401921 ANO10Q9NW15 660 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 TMEM51Q9NW97 253 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 TRMT1Q9NXH9 659 aaKnown RBP8.96□□□□□ -0.98
HDAC9-201ENST00000401921 ELP1O95163 1332 aa8.96□□□□□ -0.98
HDAC9-201ENST00000401921 SNAP23O00161 211 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 EXOC5O00471 708 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 AP5Z1O43299 807 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 TERF1P54274 439 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 HLFQ16534 295 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 ACSBG1Q96GR2 724 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 MYL10Q9BUA6 226 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 TEX13AQ9BXU3 409 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-201ENST00000401921 NAPBQ9H115 298 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 SH3TC1Q8TE82 1336 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 B4E1Z4 1266 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 DYNC1I1O14576 645 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 NRDCO43847 1150 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 ADAMTS2O95450 1211 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 TDO2P48775 406 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 METAP2P50579 478 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC9-201ENST00000401921 CASP7P55210 303 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 STX1AQ16623 288 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
HDAC9-201ENST00000401921 AOPEPQ8N6M6 819 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 LRP2BPQ9P2M1 347 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 COL15A1P39059 1388 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 CHD2O14647 1828 aaKnown RBP8.95□□□□□ -0.98
HDAC9-201ENST00000401921 KIF20AO95235 890 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 LRP10Q7Z4F1 713 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 VPS37DQ86XT2 251 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 PIGBQ92521 554 aa8.95□□□□□ -0.98
HDAC9-201ENST00000401921 MRPS27Q92552 414 aaKnown RBP8.95□□□□□ -0.98
HDAC9-201ENST00000401921 ERICH2A1L162 156 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 CCDC69A6NI79 296 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 MINDY4BA8MYZ0 360 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 IFIT3O14879 490 aaKnown RBP8.94□□□□□ -0.98
HDAC9-201ENST00000401921 CTAGE5O15320 804 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
HDAC9-201ENST00000401921 NAA16Q6N069 864 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-201ENST00000401921 PHKBQ93100 1093 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 ZKSCAN3Q9BRR0 538 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 ALG1Q9BT22 464 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 CARD10Q9BWT7 1032 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 GPR108Q9NPR9 543 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 SPTLC2O15270 562 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 TNNT1P13805 278 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 TMEM67Q5HYA8 995 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 BICDL1Q6ZP65 573 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 ZBTB38Q8NAP3 1195 aaPredicted RBP8.94□□□□□ -0.98
HDAC9-201ENST00000401921 ZBTB1Q9Y2K1 713 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 OVOS2A0A0G2JMS6 1433 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 TNS3Q68CZ2 1445 aa8.94□□□□□ -0.98
HDAC9-201ENST00000401921 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 GOLGA8AA7E2F4 631 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 PCCAP05165 728 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 SLC3A2P08195 630 aaKnown RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 ZNF75DP51815 510 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 ZNF274Q96GC6 653 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 FUCA2Q9BTY2 467 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CCDC94Q9BW85 323 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 SLC26A6Q9BXS9 759 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CLIC4Q9Y696 253 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 ZNF532Q9HCE3 1301 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CTDNEP1O95476 244 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 IARSP41252 1262 aaKnown RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 PHKA1P46020 1223 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 FAM160A1Q05DH4 1040 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 MAP3K12Q12852 859 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 SAFBQ15424 915 aaKnown RBP eCLIP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 C11orf57Q6ZUT1 292 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CREBRFQ8IUR6 639 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 MAGEB6Q8N7X4 407 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 AIFM3Q96NN9 605 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 PCDHA7Q9UN72 937 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 CIAO1O76071 339 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 ZSCAN20P17040 1043 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 TTF1Q15361 905 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 HSP90AA4PQ58FG1 418 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 GIGYF2Q6Y7W6 1299 aaKnown RBP8.93□□□□□ -0.98
HDAC9-201ENST00000401921 MIGA1Q8NAN2 632 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 PRIMPOLQ96LW4 560 aa8.93□□□□□ -0.98
HDAC9-201ENST00000401921 GTPBP4Q9BZE4 634 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms