RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 LINS1Q8NG48 757 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 DNAAF4Q8WXU2 420 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 WNK4Q96J92 1243 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 PRMT6Q96LA8 375 aaPredicted RBP18.59■□□□□ 0.57
VAMP1-203ENST00000400911 TRIM17Q9Y577 477 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 CENPFP49454 3210 aa18.59■□□□□ 0.57
VAMP1-203ENST00000400911 PDE4DIPQ5VU43 2346 aa18.58■□□□□ 0.57
VAMP1-203ENST00000400911 IGF2BP3O00425 579 aaKnown RBP eCLIP18.58■□□□□ 0.56
VAMP1-203ENST00000400911 ZBTB48P10074 688 aaPredicted RBP18.58■□□□□ 0.56
VAMP1-203ENST00000400911 CCDC27Q2M243 656 aa18.58■□□□□ 0.56
VAMP1-203ENST00000400911 CFAP100Q494V2 611 aa18.58■□□□□ 0.56
VAMP1-203ENST00000400911 JAG2Q9Y219 1238 aa18.58■□□□□ 0.56
VAMP1-203ENST00000400911 PPP2R3BQ9Y5P8 575 aa18.58■□□□□ 0.56
VAMP1-203ENST00000400911 PSME4Q14997 1843 aa18.58■□□□□ 0.56
VAMP1-203ENST00000400911 AOX1Q06278 1338 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 MYO1BO43795 1136 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 IL1R1P14778 569 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 FOXO4P98177 505 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
VAMP1-203ENST00000400911 SUPT20HL1Q3ZLR7 823 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 NBPF12Q5TAG4 269 aaPredicted RBP18.57■□□□□ 0.56
VAMP1-203ENST00000400911 C15orf52Q6ZUT6 534 aaKnown RBP18.57■□□□□ 0.56
VAMP1-203ENST00000400911 OTOP1Q7RTM1 612 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 VEZTQ9HBM0 779 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
VAMP1-203ENST00000400911 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
VAMP1-203ENST00000400911 ZNF804AQ7Z570 1209 aa18.56■□□□□ 0.56
VAMP1-203ENST00000400911 COL1A1P02452 1464 aaPredicted RBP18.56■□□□□ 0.56
VAMP1-203ENST00000400911 SSC5DA1L4H1 1573 aa18.55■□□□□ 0.56
VAMP1-203ENST00000400911 BRCA2P51587 3418 aa18.55■□□□□ 0.56
VAMP1-203ENST00000400911 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
VAMP1-203ENST00000400911 GJA5P36382 358 aa18.55■□□□□ 0.56
VAMP1-203ENST00000400911 RBM5P52756 815 aaKnown RBP eCLIP18.55■□□□□ 0.56
VAMP1-203ENST00000400911 POTEFA5A3E0 1075 aa18.54■□□□□ 0.56
VAMP1-203ENST00000400911 UNCXA6NJT0 531 aa18.54■□□□□ 0.56
VAMP1-203ENST00000400911 PLIN1O60240 522 aa18.54■□□□□ 0.56
VAMP1-203ENST00000400911 IREB2P48200 963 aaKnown RBP18.54■□□□□ 0.56
VAMP1-203ENST00000400911 FKBP1AP62942 108 aaKnown RBP18.54■□□□□ 0.56
VAMP1-203ENST00000400911 CRHR2Q13324 411 aa18.54■□□□□ 0.56
VAMP1-203ENST00000400911 RASA3Q14644 834 aa18.54■□□□□ 0.56
VAMP1-203ENST00000400911 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
VAMP1-203ENST00000400911 IL16Q14005 1332 aa18.53■□□□□ 0.56
VAMP1-203ENST00000400911 F6X3S4 739 aa18.53■□□□□ 0.56
VAMP1-203ENST00000400911 LMBR1LQ6UX01 489 aa18.53■□□□□ 0.56
VAMP1-203ENST00000400911 CD99L2Q8TCZ2 262 aa18.53■□□□□ 0.56
VAMP1-203ENST00000400911 ZNF594Q96JF6 807 aaPredicted RBP18.53■□□□□ 0.56
VAMP1-203ENST00000400911 PTPN18Q99952 460 aa18.53■□□□□ 0.56
VAMP1-203ENST00000400911 VAMP4O75379 141 aa18.52■□□□□ 0.56
VAMP1-203ENST00000400911 EPHA10Q5JZY3 1008 aa18.52■□□□□ 0.56
VAMP1-203ENST00000400911 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.56
VAMP1-203ENST00000400911 ERO1AQ96HE7 468 aa18.52■□□□□ 0.56
VAMP1-203ENST00000400911 PTPN22Q9Y2R2 807 aa18.52■□□□□ 0.56
VAMP1-203ENST00000400911 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 ZNF646O15015 1829 aaPredicted RBP18.51■□□□□ 0.55
VAMP1-203ENST00000400911 CCDC57Q2TAC2 916 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 BEND3Q5T5X7 828 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 LDHAL6AQ6ZMR3 332 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 ANKRD13AQ8IZ07 590 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 CNNM1Q9NRU3 951 aa18.51■□□□□ 0.55
VAMP1-203ENST00000400911 TESPA1A2RU30 521 aaPredicted RBP18.5■□□□□ 0.55
VAMP1-203ENST00000400911 CAP1Q01518 475 aa18.5■□□□□ 0.55
VAMP1-203ENST00000400911 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
VAMP1-203ENST00000400911 GCC1Q96CN9 775 aa18.5■□□□□ 0.55
VAMP1-203ENST00000400911 ELP3Q9H9T3 547 aa18.5■□□□□ 0.55
VAMP1-203ENST00000400911 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
VAMP1-203ENST00000400911 ZNF70Q9UC06 446 aaPredicted RBP18.5■□□□□ 0.55
VAMP1-203ENST00000400911 SP3Q02447 781 aa18.49■□□□□ 0.55
VAMP1-203ENST00000400911 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
VAMP1-203ENST00000400911 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
VAMP1-203ENST00000400911 MFSD14BQ5SR56 506 aa18.49■□□□□ 0.55
VAMP1-203ENST00000400911 OPTNQ96CV9 577 aa18.49■□□□□ 0.55
VAMP1-203ENST00000400911 TDRD3Q9H7E2 651 aaKnown RBP18.49■□□□□ 0.55
VAMP1-203ENST00000400911 TTF2Q9UNY4 1162 aaKnown RBP18.49■□□□□ 0.55
VAMP1-203ENST00000400911 SALL2Q9Y467 1007 aaPredicted RBP18.49■□□□□ 0.55
VAMP1-203ENST00000400911 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
VAMP1-203ENST00000400911 EN2P19622 333 aaPredicted RBP18.48■□□□□ 0.55
VAMP1-203ENST00000400911 GYG1P46976 350 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 TNFAIP1Q13829 316 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 CDAN1Q8IWY9 1227 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 TDRD7Q8NHU6 1098 aaKnown RBP18.48■□□□□ 0.55
VAMP1-203ENST00000400911 MS4A4AQ96JQ5 239 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 SERPINA10Q9UK55 444 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 FAM205AQ6ZU69 1335 aa18.48■□□□□ 0.55
VAMP1-203ENST00000400911 GRM8O00222 908 aa18.47■□□□□ 0.55
VAMP1-203ENST00000400911 HABP4Q5JVS0 413 aaKnown RBP18.47■□□□□ 0.55
VAMP1-203ENST00000400911 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.47■□□□□ 0.55
VAMP1-203ENST00000400911 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
VAMP1-203ENST00000400911 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
VAMP1-203ENST00000400911 ARMC5Q96C12 935 aa18.47■□□□□ 0.55
VAMP1-203ENST00000400911 TEPSINQ96N21 525 aa18.47■□□□□ 0.55
VAMP1-203ENST00000400911 TCP10L2B9ZVM9 353 aa18.46■□□□□ 0.55
VAMP1-203ENST00000400911 HIBADHP31937 336 aaKnown RBP18.46■□□□□ 0.55
VAMP1-203ENST00000400911 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
VAMP1-203ENST00000400911 BRI3BPQ8WY22 251 aa18.46■□□□□ 0.55
VAMP1-203ENST00000400911 FAM84BQ96KN1 310 aaPredicted RBP18.46■□□□□ 0.55
VAMP1-203ENST00000400911 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.55
VAMP1-203ENST00000400911 C9orf78Q9NZ63 289 aaPredicted RBP18.46■□□□□ 0.55
VAMP1-203ENST00000400911 UBE4AQ14139 1066 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms