RNA–Protein interactions for RNA: ENST00000400824.8

AFDN-208, Transcript of afadin, adherens junction formation factor, human

TSL 5

Gene AFDN, Length 875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFDN-208	ENST00000400824	TAF5L	O75529	589 aa		33.52	■■■□□ 2.96
AFDN-208	ENST00000400824	LAMB1	P07942	1786 aa		33.52	■■■□□ 2.96
AFDN-208	ENST00000400824	ALDH1A1	P00352	501 aa		33.51	■■■□□ 2.95
AFDN-208	ENST00000400824	HELB	Q8NG08	1087 aa	Predicted RBP	33.51	■■■□□ 2.95
AFDN-208	ENST00000400824	SSC5D	A1L4H1	1573 aa		33.51	■■■□□ 2.95
AFDN-208	ENST00000400824	SLC10A4	Q96EP9	437 aa		33.5	■■■□□ 2.95
AFDN-208	ENST00000400824	PCDHAC2	Q9Y5I4	1007 aa		33.5	■■■□□ 2.95
AFDN-208	ENST00000400824	PPP2R3B	Q9Y5P8	575 aa		33.5	■■■□□ 2.95
AFDN-208	ENST00000400824	MANSC4	A6NHS7	340 aa	Predicted RBP	33.49	■■■□□ 2.95
AFDN-208	ENST00000400824	IL1R1	P14778	569 aa		33.49	■■■□□ 2.95
AFDN-208	ENST00000400824	INHBE	P58166	350 aa		33.49	■■■□□ 2.95
AFDN-208	ENST00000400824	FOXO4	P98177	505 aa		33.49	■■■□□ 2.95
AFDN-208	ENST00000400824	NCBP3	Q53F19	620 aa	Known RBP	33.49	■■■□□ 2.95
AFDN-208	ENST00000400824	PPP1R12B	O60237	982 aa	Predicted RBP	33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	ZBTB48	P10074	688 aa	Predicted RBP	33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	FKBP1A	P62942	108 aa	Known RBP	33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	IFIT5	Q13325	482 aa	Known RBP	33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	IFNL1	Q8IU54	200 aa		33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	CLMN	Q96JQ2	1002 aa		33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	FANCI	Q9NVI1	1328 aa		33.47	■■■□□ 2.95
AFDN-208	ENST00000400824	VAMP4	O75379	141 aa		33.46	■■■□□ 2.95
AFDN-208	ENST00000400824	CFAP100	Q494V2	611 aa		33.46	■■■□□ 2.95
AFDN-208	ENST00000400824	ZNF804A	Q7Z570	1209 aa		33.46	■■■□□ 2.95
AFDN-208	ENST00000400824	WNK4	Q96J92	1243 aa		33.46	■■■□□ 2.95
AFDN-208	ENST00000400824	SPDYE2B	A6NHP3	402 aa		33.45	■■■□□ 2.95
AFDN-208	ENST00000400824	UNCX	A6NJT0	531 aa		33.45	■■■□□ 2.95
AFDN-208	ENST00000400824		F8W031	263 aa	Predicted RBP	33.45	■■■□□ 2.95
AFDN-208	ENST00000400824	SPDYE6	P0CI01	402 aa		33.45	■■■□□ 2.95
AFDN-208	ENST00000400824	PRMT6	Q96LA8	375 aa	Predicted RBP	33.45	■■■□□ 2.95
AFDN-208	ENST00000400824	CLRN2	A0PK11	232 aa		33.44	■■■□□ 2.94
AFDN-208	ENST00000400824	MYO1B	O43795	1136 aa		33.44	■■■□□ 2.94
AFDN-208	ENST00000400824	SUPT20HL1	Q3ZLR7	823 aa		33.43	■■■□□ 2.94
AFDN-208	ENST00000400824	BEND3	Q5T5X7	828 aa		33.43	■■■□□ 2.94
AFDN-208	ENST00000400824	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.43	■■■□□ 2.94
AFDN-208	ENST00000400824	CHMP3	Q9Y3E7	222 aa		33.43	■■■□□ 2.94
AFDN-208	ENST00000400824	AOX1	Q06278	1338 aa		33.43	■■■□□ 2.94
AFDN-208	ENST00000400824	IGF2BP3	O00425	579 aa	Known RBP eCLIP	33.42	■■■□□ 2.94
AFDN-208	ENST00000400824	NBPF12	Q5TAG4	269 aa	Predicted RBP	33.41	■■■□□ 2.94
AFDN-208	ENST00000400824	HTT	P42858	3142 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824		F6X3S4	739 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	EPHA10	Q5JZY3	1008 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	LMBR1L	Q6UX01	489 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	VEZT	Q9HBM0	779 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	JAG2	Q9Y219	1238 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	TRIM17	Q9Y577	477 aa		33.4	■■■□□ 2.94
AFDN-208	ENST00000400824	ZNF594	Q96JF6	807 aa	Predicted RBP	33.39	■■■□□ 2.94
AFDN-208	ENST00000400824	USP2	O75604	605 aa	Predicted RBP	33.38	■■■□□ 2.93
AFDN-208	ENST00000400824	IREB2	P48200	963 aa	Known RBP	33.38	■■■□□ 2.93
AFDN-208	ENST00000400824	EXOSC9	Q06265	439 aa	Known RBP	33.38	■■■□□ 2.93
AFDN-208	ENST00000400824	OTOP1	Q7RTM1	612 aa		33.38	■■■□□ 2.93
AFDN-208	ENST00000400824	GJA5	P36382	358 aa		33.37	■■■□□ 2.93
AFDN-208	ENST00000400824	LDHAL6A	Q6ZMR3	332 aa		33.37	■■■□□ 2.93
AFDN-208	ENST00000400824	KIAA0100	Q14667	2235 aa	Known RBP	33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	FAM205A	Q6ZU69	1335 aa		33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	PLIN1	O60240	522 aa		33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	RASA3	Q14644	834 aa		33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	CCDC57	Q2TAC2	916 aa		33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	WDR63	Q8IWG1	891 aa		33.36	■■■□□ 2.93
AFDN-208	ENST00000400824	OTOF	Q9HC10	1997 aa		33.35	■■■□□ 2.93
AFDN-208	ENST00000400824	RBM5	P52756	815 aa	Known RBP eCLIP	33.35	■■■□□ 2.93	4e-6	■■■■□ 21.7
AFDN-208	ENST00000400824	ANKRD13A	Q8IZ07	590 aa		33.34	■■■□□ 2.93
AFDN-208	ENST00000400824	CNNM1	Q9NRU3	951 aa		33.34	■■■□□ 2.93
AFDN-208	ENST00000400824	GRM8	O00222	908 aa		33.33	■■■□□ 2.93
AFDN-208	ENST00000400824	TAF7L	Q5H9L4	462 aa		33.33	■■■□□ 2.93
AFDN-208	ENST00000400824	OTUD7B	Q6GQQ9	843 aa		33.33	■■■□□ 2.93
AFDN-208	ENST00000400824	TDRD7	Q8NHU6	1098 aa	Known RBP	33.33	■■■□□ 2.93
AFDN-208	ENST00000400824	ERO1A	Q96HE7	468 aa		33.33	■■■□□ 2.93
AFDN-208	ENST00000400824	TESPA1	A2RU30	521 aa	Predicted RBP	33.32	■■■□□ 2.92
AFDN-208	ENST00000400824	CRHR2	Q13324	411 aa		33.32	■■■□□ 2.92
AFDN-208	ENST00000400824	SPDYE2	Q495Y8	402 aa		33.32	■■■□□ 2.92
AFDN-208	ENST00000400824	INTS3	Q68E01	1043 aa	Known RBP	33.32	■■■□□ 2.92
AFDN-208	ENST00000400824	PTPN18	Q99952	460 aa		33.31	■■■□□ 2.92
AFDN-208	ENST00000400824	ZNF70	Q9UC06	446 aa	Predicted RBP	33.31	■■■□□ 2.92
AFDN-208	ENST00000400824	SALL2	Q9Y467	1007 aa	Predicted RBP	33.31	■■■□□ 2.92
AFDN-208	ENST00000400824	TNFAIP1	Q13829	316 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	UBE4A	Q14139	1066 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	MFSD14B	Q5SR56	506 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	SERPINA10	Q9UK55	444 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	PTPN22	Q9Y2R2	807 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	ARAP2	Q8WZ64	1704 aa		33.3	■■■□□ 2.92
AFDN-208	ENST00000400824	RBBP6	Q7Z6E9	1792 aa	Known RBP	33.29	■■■□□ 2.92
AFDN-208	ENST00000400824	CD99L2	Q8TCZ2	262 aa		33.29	■■■□□ 2.92
AFDN-208	ENST00000400824	TTF2	Q9UNY4	1162 aa	Known RBP	33.29	■■■□□ 2.92
AFDN-208	ENST00000400824	POTEF	A5A3E0	1075 aa		33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	HIBADH	P31937	336 aa	Known RBP	33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	GYG1	P46976	350 aa		33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	FAM84B	Q96KN1	310 aa	Predicted RBP	33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	TEPSIN	Q96N21	525 aa		33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	TDRD3	Q9H7E2	651 aa	Known RBP	33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	CENPF	P49454	3210 aa		33.28	■■■□□ 2.92
AFDN-208	ENST00000400824	ELP3	Q9H9T3	547 aa		33.27	■■■□□ 2.92
AFDN-208	ENST00000400824	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.27	■■■□□ 2.92
AFDN-208	ENST00000400824	ALDH1L1	O75891	902 aa		33.26	■■■□□ 2.91
AFDN-208	ENST00000400824	OPTN	Q96CV9	577 aa		33.26	■■■□□ 2.91
AFDN-208	ENST00000400824	MS4A4A	Q96JQ5	239 aa		33.26	■■■□□ 2.91
AFDN-208	ENST00000400824	MRS2	Q9HD23	443 aa		33.26	■■■□□ 2.91
AFDN-208	ENST00000400824	MKI67	P46013	3256 aa	Known RBP	33.26	■■■□□ 2.91
AFDN-208	ENST00000400824	SP3	Q02447	781 aa		33.25	■■■□□ 2.91
AFDN-208	ENST00000400824	CDAN1	Q8IWY9	1227 aa		33.25	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms