RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 OPA1O60313 960 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 KRT9P35527 623 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 MCM6Q14566 821 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 BOLA2Q9H3K6 86 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 STIM2Q9P246 746 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 CASP2P42575 452 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 CCDC172P0C7W6 258 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 C4orf50Q6ZRC1 276 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 NOP56O00567 594 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 NME9Q86XW9 330 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 RSRC1Q96IZ7 334 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 CCDC14Q49A88 953 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 TNPO1Q92973 898 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 NEDD9Q14511 834 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 TMTC4Q5T4D3 741 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 UBLCP1Q8WVY7 318 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 WDR33Q9C0J8 1336 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-217ENST00000399641 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 CALM1P0DP23 149 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 CALM2P0DP24 149 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 CALM3P0DP25 149 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 RAB3GAP1Q15042 981 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 SDCCAG8Q86SQ7 713 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 CNNM3Q8NE01 707 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 HNRNPCL1O60812 293 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 IGSF3O75054 1194 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 WBP4O75554 376 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 GAS8O95995 478 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 MAN1A1P33908 653 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 MCM2P49736 904 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 E7EVH7 732 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 CYP7A1P22680 504 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 TRIM55Q9BYV6 548 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 VPS18Q9P253 973 aa12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.4
CACNA1C-217ENST00000399641 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 FAM13AO94988 1023 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 SETSIPP0DME0 302 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 BRD3Q15059 726 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 IMPG2Q9BZV3 1241 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 VCX3BQ9H321 246 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 ATP11AP98196 1134 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 VCXQ9H320 206 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 METTL14Q9HCE5 456 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 UFL1O94874 794 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 CLNS1AP54105 237 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 USP37Q86T82 979 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
CACNA1C-217ENST00000399641 UQCRFS1P1P0C7P4 283 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 GBP6Q6ZN66 633 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 KIFC2Q96AC6 838 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 ABCF3Q9NUQ8 709 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 MCM7P33993 719 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 PPFIBP2Q8ND30 876 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 SNRKQ9NRH2 765 aa12.52□□□□□ -0.4
CACNA1C-217ENST00000399641 PLCG2P16885 1265 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 CCDC110Q8TBZ0 833 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 JARID2Q92833 1246 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 GCC1Q96CN9 775 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 SPAG5Q96R06 1193 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 ANKRD2Q9GZV1 360 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 TCP11L1Q9NUJ3 509 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.41
CACNA1C-217ENST00000399641 C6orf50Q9HD87 102 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms