RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 PRPHP41219 470 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 DKC1O60832 514 aaKnown RBP eCLIP13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 PAGR1Q9BTK6 254 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
CACNA1C-213ENST00000399629 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 SMTNP53814 917 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 GABPAQ06546 454 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 TCP10Q12799 353 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 LRRC2Q9BYS8 371 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 ZRANB1Q9UGI0 708 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 SHTN1A0MZ66 631 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 RNF113AO15541 343 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 NR1I2O75469 434 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 FAM200AQ8TCP9 573 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 FLT4P35916 1363 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 KRT5P13647 590 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 TMC6Q7Z403 805 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC63Q8NA47 563 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 ABCC1P33527 1531 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 N4BP3O15049 544 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 SYKP43405 635 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 MCM7P33993 719 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 BIRC3Q13489 604 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 TRPC3Q13507 836 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 RASAL2Q9UJF2 1139 aa13.67□□□□□ -0.22
CACNA1C-213ENST00000399629 ZMYM3Q14202 1370 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 EIF4A2Q14240 407 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 NOC2LQ9Y3T9 749 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 BRF1Q92994 677 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 TERF1P54274 439 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 C2CD5Q86YS7 1000 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 Q6ZUG5 572 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 SELENOOQ9BVL4 669 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 FAM169AQ9Y6X4 670 aa13.66□□□□□ -0.22
CACNA1C-213ENST00000399629 NPATQ14207 1427 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 AKR1B10O60218 316 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 KCNA6P17658 529 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 ARID5AQ03989 594 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 FRMD4BQ9Y2L6 1034 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 DDX39AO00148 427 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 TRIM27P14373 513 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 TFCP2Q12800 502 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 CHST3Q7LGC8 479 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 MAATS1Q7Z4T9 603 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 PSMA7O14818 248 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 DAPK3O43293 454 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 CCDC175P0C221 793 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 ITGA6P23229 1130 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 CPXCR1Q8N123 301 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 KIAA1524Q8TCG1 905 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.22
CACNA1C-213ENST00000399629 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 PDE8AO60658 829 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 CFAP58Q5T655 872 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 STX10O60499 249 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 HOXC9P31274 260 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 IP6K1Q92551 441 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 ARHGEF10O15013 1369 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 PUM3Q15397 648 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 GTF3C6Q969F1 213 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 SERPINA10Q9UK55 444 aa13.64□□□□□ -0.23
CACNA1C-213ENST00000399629 RASA3Q14644 834 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 HAUS2Q9NVX0 235 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 DHX58Q96C10 678 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
CACNA1C-213ENST00000399629 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms