RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 STAT6P42226 847 aa9.08□□□□□ -0.96
USP47-203ENST00000399455 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
USP47-203ENST00000399455 TFCP2Q12800 502 aa9.08□□□□□ -0.96
USP47-203ENST00000399455 JAG2Q9Y219 1238 aa9.08□□□□□ -0.96
USP47-203ENST00000399455 JCADQ9P266 1359 aa9.08□□□□□ -0.96
USP47-203ENST00000399455 TRIM27P14373 513 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 BICC1Q9H694 974 aaKnown RBP9.07□□□□□ -0.96
USP47-203ENST00000399455 SPATA31A6Q5VVP1 1343 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 LMAN1P49257 510 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 C2orf69Q8N8R5 385 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 LPIN2Q92539 896 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 IFT74Q96LB3 600 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP47-203ENST00000399455 IREB2P48200 963 aaKnown RBP9.07□□□□□ -0.96
USP47-203ENST00000399455 GOLGA1Q92805 767 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 TSNARE1Q96NA8 513 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 ORC3Q9UBD5 711 aaPredicted RBP9.07□□□□□ -0.96
USP47-203ENST00000399455 ELMSAN1Q6PJG2 1045 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 FAM89AQ96GI7 184 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 HELLSQ9NRZ9 838 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 KLF18A0A0U1RQI7 1052 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 RBM25P49756 843 aaKnown RBP9.07□□□□□ -0.96
USP47-203ENST00000399455 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 SMTNP53814 917 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 HAUS2Q9NVX0 235 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 ANO10Q9NW15 660 aa9.07□□□□□ -0.96
USP47-203ENST00000399455 FBLN1P23142 703 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 NLRX1Q86UT6 975 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 MRPL50Q8N5N7 158 aaKnown RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 LZTS2Q9BRK4 669 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 DNAJC10Q8IXB1 793 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 ZBTB21Q9ULJ3 1066 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 CEP83Q9Y592 693 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 SNX16P57768 344 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 STRN3Q13033 797 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 TTC37Q6PGP7 1564 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 GCKRQ14397 625 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 MAP3K11Q16584 847 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 KRT79Q5XKE5 535 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 USP40Q9NVE5 1235 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 TTF2Q9UNY4 1162 aaKnown RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 SIK1P57059 783 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 SLC27A3Q5K4L6 730 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 RIMBP3CA6NJZ7 1639 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 RIMBP3BA6NNM3 1639 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 RIMBP3Q9UFD9 1639 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 PHKG2P15735 406 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 NASPP49321 788 aaPredicted RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 CTSWP56202 376 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 IFI16Q16666 785 aaKnown RBP9.06□□□□□ -0.96
USP47-203ENST00000399455 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
USP47-203ENST00000399455 EYA2O00167 538 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 USO1O60763 962 aaKnown RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 CTNNBL1Q8WYA6 563 aaPredicted RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 PAGR1Q9BTK6 254 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 KCNG1Q9UIX4 513 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 EXOC7Q9UPT5 735 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.05□□□□□ -0.961e-6■■□□□ 11.4
USP47-203ENST00000399455 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 USP14P54578 494 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 GUCY1B3Q02153 619 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 EP400NLQ6ZTU2 488 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 CHURC1Q8WUH1 139 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 GPCPD1Q9NPB8 672 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 ACTN2P35609 894 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 RPS8P62241 208 aaKnown RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 SP4Q02446 784 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 MAP3K4Q9Y6R4 1608 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 YEATS4O95619 227 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 MYCLP12524 364 aaPredicted RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 DDX12PQ92771 950 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 ALG1Q9BT22 464 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 NPR1P16066 1061 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 SSFA2P28290 1259 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 HOXD10P28358 340 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 CRKLP46109 303 aaKnown RBP9.05□□□□□ -0.96
USP47-203ENST00000399455 TAOK3Q9H2K8 898 aa9.05□□□□□ -0.96
USP47-203ENST00000399455 MBD4O95243 580 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 GTF2IP78347 998 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 TCP10Q12799 353 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
USP47-203ENST00000399455 CWF19L2Q2TBE0 894 aaKnown RBP9.04□□□□□ -0.96
USP47-203ENST00000399455 FAM47CQ5HY64 1035 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 RGS22Q8NE09 1264 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
USP47-203ENST00000399455 SPON1Q9HCB6 807 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 XDHP47989 1333 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 CFAP100Q494V2 611 aa9.04□□□□□ -0.96
USP47-203ENST00000399455 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 404.6 ms