RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.31
ITSN1-210ENST00000399353 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.31
ITSN1-210ENST00000399353 A0A087WUV0 522 aaPredicted RBP17.02■□□□□ 0.31
ITSN1-210ENST00000399353 NF2P35240 595 aa17.02■□□□□ 0.31
ITSN1-210ENST00000399353 ZNF827Q17R98 1081 aa17.02■□□□□ 0.31
ITSN1-210ENST00000399353 CTAGE9A4FU28 777 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 PNOCQ13519 176 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 GOLGA6L9A6NEM1 432 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 HAND2P61296 217 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 SF3A3Q12874 501 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■■■■ 27.2
ITSN1-210ENST00000399353 WASHC4Q2M389 1173 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 LRRC31Q6UY01 552 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 CEP112Q8N8E3 955 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 HIP1O00291 1037 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 CCDC148Q8NFR7 591 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 CLIC4Q9Y696 253 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 EID1Q9Y6B2 187 aa17.01■□□□□ 0.31
ITSN1-210ENST00000399353 CORO7P57737 925 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 KIF24Q5T7B8 1368 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 DDX58O95786 925 aaKnown RBP17■□□□□ 0.31
ITSN1-210ENST00000399353 SCRN1Q12765 414 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 TOB2Q14106 344 aaPredicted RBP17■□□□□ 0.31
ITSN1-210ENST00000399353 TRIM65Q6PJ69 517 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
ITSN1-210ENST00000399353 SRGAP1Q7Z6B7 1085 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
ITSN1-210ENST00000399353 VWA3AA6NCI4 1184 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 VSNL1P62760 191 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
ITSN1-210ENST00000399353 GUCA1BQ9UMX6 200 aa17■□□□□ 0.31
ITSN1-210ENST00000399353 PPFIA4O75335 1185 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 NLRP12P59046 1061 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
ITSN1-210ENST00000399353 KRT32Q14532 448 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 RCOR1Q9UKL0 485 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 ABCA8O94911 1581 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 EIF5P55010 431 aaKnown RBP16.99■□□□□ 0.31
ITSN1-210ENST00000399353 FAM76AQ8TAV0 307 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 SCLT1Q96NL6 688 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 PNKPQ96T60 521 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 SOWAHDA6NJG2 315 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 NDUFAB1O14561 156 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
ITSN1-210ENST00000399353 RBM33Q96EV2 1170 aaKnown RBP16.99■□□□□ 0.31
ITSN1-210ENST00000399353 CDC5LQ99459 802 aaKnown RBP16.99■□□□□ 0.31
ITSN1-210ENST00000399353 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
ITSN1-210ENST00000399353 CHGBP05060 677 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
ITSN1-210ENST00000399353 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 FAM169AQ9Y6X4 670 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 ACEP12821 1306 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 CROCC2H7BZ55 1655 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 POTEB2H3BUK9 544 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 MRFAP1Q9Y605 127 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 ARHGEF40Q8TER5 1519 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 DNA2P51530 1060 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 CHPF2Q9P2E5 772 aa16.98■□□□□ 0.31
ITSN1-210ENST00000399353 MADDQ8WXG6 1647 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 GOLGA6CA6NDK9 693 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 GOLGA6DP0CG33 693 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 MAP3K9P80192 1104 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 GOLGA6AQ9NYA3 693 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-210ENST00000399353 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 ENC1O14682 589 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 RBM43Q6ZSC3 357 aaKnown RBP16.97■□□□□ 0.31
ITSN1-210ENST00000399353 CCDC82Q8N4S0 544 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 FAM71BQ8TC56 605 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 MAP4K1Q92918 833 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 ATP1A2P50993 1020 aa16.97■□□□□ 0.31
ITSN1-210ENST00000399353 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
ITSN1-210ENST00000399353 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
ITSN1-210ENST00000399353 PSME1Q06323 249 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 ACTN3Q08043 901 aaPredicted RBP16.96■□□□□ 0.31
ITSN1-210ENST00000399353 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 SLC35F6Q8N357 371 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 CCDC70Q6NSX1 233 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 EHD4Q9H223 541 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 GOLIM4O00461 696 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 COBLO75128 1261 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 SCP2P22307 547 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 HNRNPH1P31943 449 aaKnown RBP16.96■□□□□ 0.31
ITSN1-210ENST00000399353 GNGT1P63211 74 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 STIM1Q13586 685 aa16.96■□□□□ 0.31
ITSN1-210ENST00000399353 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
ITSN1-210ENST00000399353 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
ITSN1-210ENST00000399353 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
ITSN1-210ENST00000399353 TULP1O00294 542 aaPredicted RBP16.95■□□□□ 0.3
ITSN1-210ENST00000399353 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
ITSN1-210ENST00000399353 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
ITSN1-210ENST00000399353 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms