RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 JAG2Q9Y219 1238 aa15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 WDR90Q96KV7 1748 aa15.26■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GLTPD2A6NH11 291 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 G3V3G9 751 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GTF2IP78347 998 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GMLQ99445 158 aa15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
HLA-DQB1-203ENST00000399082 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 POTECB2RU33 542 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 MCAMP43121 646 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 NUCB1Q02818 461 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GRIK5Q16478 980 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 STRIP1Q5VSL9 837 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 VPS37DQ86XT2 251 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GPC2Q8N158 579 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
HLA-DQB1-203ENST00000399082 SHTN1A0MZ66 631 aa15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 SCNN1DP51172 638 aa15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 CHAF1AQ13111 956 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 TTLL5Q6EMB2 1281 aa15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GJA3Q9Y6H8 435 aa15.23■□□□□ 0.03
HLA-DQB1-203ENST00000399082 PDS5AQ29RF7 1337 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 SEMA3EO15041 775 aa15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 TNIP1Q15025 636 aa15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 GORABQ5T7V8 394 aa15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 MYO5AQ9Y4I1 1855 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-203ENST00000399082 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 YY1P25490 414 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 PDE4AP27815 886 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 TTC39AQ5SRH9 613 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 FBXW7Q969H0 707 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 NDUFB9Q9Y6M9 179 aa15.21■□□□□ 0.03
HLA-DQB1-203ENST00000399082 SCN4AP35499 1836 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ZAP70P43403 619 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 DPY19L2Q6NUT2 758 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ZNF526Q8TF50 670 aaPredicted RBP15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 CCDC136Q96JN2 1154 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 NMRK2Q9NPI5 230 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 GNL3LQ9NVN8 582 aaKnown RBP15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
HLA-DQB1-203ENST00000399082 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 EGFRP00533 1210 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ATP5JP18859 108 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 EPS15P42566 896 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 MFSD14BQ5SR56 506 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 CENPQQ7L2Z9 268 aaPredicted RBP15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 AGBL3Q8NEM8 1001 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PI4K2BQ8TCG2 481 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 DPF2Q92785 391 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ECHDC1Q9NTX5 307 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 GPRC5DQ9NZD1 345 aa15.19■□□□□ 0.02
HLA-DQB1-203ENST00000399082 MX1P20591 662 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PRDX5P30044 214 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 WDR66Q8TBY9 1149 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ZNF384Q8TF68 577 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 EDC3Q96F86 508 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
HLA-DQB1-203ENST00000399082 MYO3BQ8WXR4 1341 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 MAST2Q6P0Q8 1798 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 KIAA0825Q8IV33 1275 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 ZNF784Q8NCA9 323 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 TBC1D22AQ8WUA7 517 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
HLA-DQB1-203ENST00000399082 CNOT7Q9UIV1 285 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms