RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 OGFRQ9NZT2 677 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 RPL13P26373 211 aaKnown RBP9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC14Q49A88 953 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 DHX37Q8IY37 1157 aaKnown RBP9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 PBRM1Q86U86 1689 aa9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 YTHDC2Q9H6S0 1430 aaKnown RBP9.46□□□□□ -0.9
SPTLC3-201ENST00000399002 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC144CPQ8IYA2 1237 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 MEIS3Q99687 375 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 NUP58Q9BVL2 599 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 NBPF6Q5VWK0 638 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 NBPF5PQ86XG9 351 aaPredicted RBP9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SMARCC2Q8TAQ2 1214 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 NBPF4Q96M43 638 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC121Q6ZUS5 278 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 XAGE3Q8WTP9 111 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SH2D4AQ9H788 454 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 TTF2Q9UNY4 1162 aaKnown RBP9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SAMM50Q9Y512 469 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 FAM13AO94988 1023 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 CSRNP2Q9H175 543 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 DACT1Q9NYF0 836 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 SWAP70Q9UH65 585 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 MTUS1Q9ULD2 1270 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 HAND2P61296 217 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 DNAI1Q9UI46 699 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 DENND2AQ9ULE3 1009 aa9.45□□□□□ -0.9
SPTLC3-201ENST00000399002 TERF1P54274 439 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC186Q7Z3E2 898 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 IQUBQ8NA54 791 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 MACROD2A1Z1Q3 448 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 GPTP24298 496 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 EIF4A2Q14240 407 aaKnown RBP9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 ZBTB40Q9NUA8 1239 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 ARHGEF10O15013 1369 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 UBXN1Q04323 297 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 FCHSD1Q86WN1 690 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC26Q8TAB7 109 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC42Q96M95 316 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 ABCA5Q8WWZ7 1642 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 AFMP43652 599 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 AK2P54819 239 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 FAM160A1Q05DH4 1040 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 NCBP1Q09161 790 aaKnown RBP9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 SEL1L2Q5TEA6 688 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC65Q8IXS2 484 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 KIFAP3Q92845 792 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 DNAJC25Q9H1X3 360 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 AKR1B15C9JRZ8 316 aaPredicted RBP9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CALUO43852 315 aaPredicted RBP9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 ERO1AQ96HE7 468 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 EYA3Q99504 573 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 CEP83Q9Y592 693 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 KDM5DQ9BY66 1539 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 SBNO1A3KN83 1393 aa9.44□□□□□ -0.9
SPTLC3-201ENST00000399002 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 MYL5Q02045 173 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 RILPL1Q5EBL4 403 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 CNNM4Q6P4Q7 775 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 LZTS2Q9BRK4 669 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 CHMLP26374 656 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 NECAB1Q8N987 351 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 SMC6Q96SB8 1091 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 ATP5J2-PTCD1G3V325 749 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 PHACTR2O75167 634 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 CYP26C1Q6V0L0 522 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 COMMD10Q9Y6G5 202 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 FAM83GA6ND36 823 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 DEXIO95424 95 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 DNA2P51530 1060 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 SLC9C2Q5TAH2 1124 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 HS2ST1Q7LGA3 356 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 TICAM2Q86XR7 235 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 ANAPC4Q9UJX5 808 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 MAST3O60307 1309 aa9.43□□□□□ -0.9
SPTLC3-201ENST00000399002 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms