RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 CD209Q9NNX6 404 aa18.22■□□□□ 0.51
RAB1A-201ENST00000398529 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
RAB1A-201ENST00000398529 IREB2P48200 963 aaKnown RBP18.21■□□□□ 0.51
RAB1A-201ENST00000398529 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
RAB1A-201ENST00000398529 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
RAB1A-201ENST00000398529 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
RAB1A-201ENST00000398529 KLRK1P26718 216 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 IFIT5Q13325 482 aaKnown RBP18.2■□□□□ 0.5
RAB1A-201ENST00000398529 FKBP5Q13451 457 aaPredicted RBP18.2■□□□□ 0.5
RAB1A-201ENST00000398529 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
RAB1A-201ENST00000398529 ZBED3Q96IU2 234 aaPredicted RBP18.2■□□□□ 0.5
RAB1A-201ENST00000398529 WNK4Q96J92 1243 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
RAB1A-201ENST00000398529 CACNA1FO60840 1977 aa18.19■□□□□ 0.5
RAB1A-201ENST00000398529 F8W031 263 aaPredicted RBP18.19■□□□□ 0.5
RAB1A-201ENST00000398529 CSF1RP07333 972 aa18.19■□□□□ 0.5
RAB1A-201ENST00000398529 ARHGEF6Q15052 776 aa18.19■□□□□ 0.5
RAB1A-201ENST00000398529 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
RAB1A-201ENST00000398529 LINS1Q8NG48 757 aa18.19■□□□□ 0.5
RAB1A-201ENST00000398529 CLRN2A0PK11 232 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 FLIIQ13045 1269 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 TAF7LQ5H9L4 462 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 G2E3Q7L622 706 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 OTOP1Q7RTM1 612 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 FZD1Q9UP38 647 aa18.18■□□□□ 0.5
RAB1A-201ENST00000398529 TAF5LO75529 589 aa18.17■□□□□ 0.5
RAB1A-201ENST00000398529 FKBP1AP62942 108 aaKnown RBP18.17■□□□□ 0.5
RAB1A-201ENST00000398529 TNFAIP1Q13829 316 aa18.17■□□□□ 0.5
RAB1A-201ENST00000398529 C15orf52Q6ZUT6 534 aaKnown RBP18.17■□□□□ 0.5
RAB1A-201ENST00000398529 ANKRD13AQ8IZ07 590 aa18.17■□□□□ 0.5
RAB1A-201ENST00000398529 CLMNQ96JQ2 1002 aa18.17■□□□□ 0.5
RAB1A-201ENST00000398529 EFCC1Q9HA90 598 aa18.17■□□□□ 0.5
RAB1A-201ENST00000398529 SPDYE2BA6NHP3 402 aa18.16■□□□□ 0.5
RAB1A-201ENST00000398529 WDHD1O75717 1129 aaPredicted RBP18.16■□□□□ 0.5
RAB1A-201ENST00000398529 SPDYE6P0CI01 402 aa18.16■□□□□ 0.5
RAB1A-201ENST00000398529 HELBQ8NG08 1087 aaPredicted RBP18.16■□□□□ 0.5
RAB1A-201ENST00000398529 IGF2BP3O00425 579 aaKnown RBP eCLIP18.15■□□□□ 0.5
RAB1A-201ENST00000398529 IL1R1P14778 569 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 SP3Q02447 781 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 CERS5Q8N5B7 392 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 PRMT6Q96LA8 375 aaPredicted RBP18.15■□□□□ 0.5
RAB1A-201ENST00000398529 TMEM106CQ9BVX2 250 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 PTPN22Q9Y2R2 807 aa18.15■□□□□ 0.5
RAB1A-201ENST00000398529 PLIN1O60240 522 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 CRHR2Q13324 411 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 RASA3Q14644 834 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 CCDC27Q2M243 656 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 NBPF12Q5TAG4 269 aaPredicted RBP18.14■□□□□ 0.49
RAB1A-201ENST00000398529 CD99L2Q8TCZ2 262 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 CNNM1Q9NRU3 951 aa18.14■□□□□ 0.49
RAB1A-201ENST00000398529 USP2O75604 605 aaPredicted RBP18.13■□□□□ 0.49
RAB1A-201ENST00000398529 CASP7P55210 303 aa18.13■□□□□ 0.49
RAB1A-201ENST00000398529 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
RAB1A-201ENST00000398529 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
RAB1A-201ENST00000398529 LAMB1P07942 1786 aa18.12■□□□□ 0.49
RAB1A-201ENST00000398529 TNNI2P48788 182 aa18.12■□□□□ 0.49
RAB1A-201ENST00000398529 WWC1Q8IX03 1113 aa18.12■□□□□ 0.49
RAB1A-201ENST00000398529 IL16Q14005 1332 aa18.12■□□□□ 0.49
RAB1A-201ENST00000398529 KIAA0100Q14667 2235 aaKnown RBP18.12■□□□□ 0.49
RAB1A-201ENST00000398529 POTEFA5A3E0 1075 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 SNAP23O00161 211 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 HABP4Q5JVS0 413 aaKnown RBP18.11■□□□□ 0.49
RAB1A-201ENST00000398529 OPTNQ96CV9 577 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 ZFYVE28Q9HCC9 887 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 TTF2Q9UNY4 1162 aaKnown RBP18.11■□□□□ 0.49
RAB1A-201ENST00000398529 JAG2Q9Y219 1238 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 PCDHAC2Q9Y5I4 1007 aa18.11■□□□□ 0.49
RAB1A-201ENST00000398529 RBBP6Q7Z6E9 1792 aaKnown RBP18.1■□□□□ 0.49
RAB1A-201ENST00000398529 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 MFSD14BQ5SR56 506 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 ARMC5Q96C12 935 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 SERPINA10Q9UK55 444 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 CSADQ9Y600 493 aa18.1■□□□□ 0.49
RAB1A-201ENST00000398529 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
RAB1A-201ENST00000398529 HIBADHP31937 336 aaKnown RBP18.09■□□□□ 0.49
RAB1A-201ENST00000398529 GTF2A2P52657 109 aa18.09■□□□□ 0.49
RAB1A-201ENST00000398529 FOXO4P98177 505 aa18.09■□□□□ 0.49
RAB1A-201ENST00000398529 SLC9C1Q4G0N8 1177 aa18.09■□□□□ 0.49
RAB1A-201ENST00000398529 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
RAB1A-201ENST00000398529 ZNF70Q9UC06 446 aaPredicted RBP18.09■□□□□ 0.49
RAB1A-201ENST00000398529 FAM205AQ6ZU69 1335 aa18.08■□□□□ 0.49
RAB1A-201ENST00000398529 IRS2Q9Y4H2 1338 aa18.08■□□□□ 0.49
RAB1A-201ENST00000398529 KIF22Q14807 665 aa18.08■□□□□ 0.48
RAB1A-201ENST00000398529 TAF1CQ15572 869 aaPredicted RBP18.08■□□□□ 0.48
RAB1A-201ENST00000398529 SLC4A8Q2Y0W8 1093 aa18.08■□□□□ 0.48
RAB1A-201ENST00000398529 SPDYE2Q495Y8 402 aa18.08■□□□□ 0.48
RAB1A-201ENST00000398529 VPS37DQ86XT2 251 aa18.08■□□□□ 0.48
RAB1A-201ENST00000398529 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
RAB1A-201ENST00000398529 CCL15-CCL14A0A0B4J2E2 113 aa18.07■□□□□ 0.48
RAB1A-201ENST00000398529 FRAT2O75474 233 aaPredicted RBP18.07■□□□□ 0.48
RAB1A-201ENST00000398529 EN2P19622 333 aaPredicted RBP18.07■□□□□ 0.48
RAB1A-201ENST00000398529 GJA5P36382 358 aa18.07■□□□□ 0.48
RAB1A-201ENST00000398529 MAP3K9P80192 1104 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms