RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 KDM5BQ9UGL1 1544 aa11.22□□□□□ -0.61
CDH7-202ENST00000397968 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
CDH7-202ENST00000397968 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
CDH7-202ENST00000397968 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
CDH7-202ENST00000397968 MXRA7P84157 204 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 HS2ST1Q7LGA3 356 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 GLT8D2Q9H1C3 349 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 CPSF2Q9P2I0 782 aaKnown RBP11.21□□□□□ -0.61
CDH7-202ENST00000397968 PLCD1P51178 756 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 KSR2Q6VAB6 950 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 ZSWIM4Q9H7M6 989 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 FANCAO15360 1455 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 SHANK2Q9UPX8 1470 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 C10orf67Q8IYJ2 551 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 CACNA2D3Q8IZS8 1091 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 PAG1Q9NWQ8 432 aa11.21□□□□□ -0.61
CDH7-202ENST00000397968 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.62
CDH7-202ENST00000397968 RASSF2P50749 326 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 AK2P54819 239 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 IFT20Q8IY31 132 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 PLCG2P16885 1265 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 PPFIA1Q13136 1202 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 DTHD1Q6ZMT9 781 aa11.21□□□□□ -0.62
CDH7-202ENST00000397968 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.62
CDH7-202ENST00000397968 MRPL50Q8N5N7 158 aaKnown RBP11.2□□□□□ -0.62
CDH7-202ENST00000397968 STX8Q9UNK0 236 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 ARHGAP6O43182 974 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 LIG1P18858 919 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 SYNCQ9H7C4 482 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
CDH7-202ENST00000397968 TXNDC16Q9P2K2 825 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 KIF3CO14782 793 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 NME9Q86XW9 330 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 STMN2Q93045 179 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 MAP7D1Q3KQU3 841 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 COMMD10Q9Y6G5 202 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 MPRIPQ6WCQ1 1025 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 CEP57Q86XR8 500 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
CDH7-202ENST00000397968 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 SAMM50Q9Y512 469 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 ZBTB16Q05516 673 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 GSTA5Q7RTV2 222 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
CDH7-202ENST00000397968 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
CDH7-202ENST00000397968 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 AFMP43652 599 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 PPP2R3AQ06190 1150 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 GUCA1BQ9UMX6 200 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDH7-202ENST00000397968 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDH7-202ENST00000397968 MLKLQ8NB16 471 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 KIFAP3Q92845 792 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 ARHGAP24Q8N264 748 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 LINS1Q8NG48 757 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 MEIS3Q99687 375 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 UTP11Q9Y3A2 253 aaKnown RBP11.19□□□□□ -0.62
CDH7-202ENST00000397968 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 FYB2Q5VWT5 728 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 VCX3BQ9H321 246 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 FLT4P35916 1363 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 B4DLN1 442 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 MRPL12P52815 198 aaKnown RBP11.19□□□□□ -0.62
CDH7-202ENST00000397968 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 NKIRAS1Q9NYS0 192 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 CHMP4BP1P59074 171 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
CDH7-202ENST00000397968 PANK2Q9BZ23 570 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 AKAP4Q5JQC9 854 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
CDH7-202ENST00000397968 TCOF1Q13428 1488 aaKnown RBP11.19□□□□□ -0.62
CDH7-202ENST00000397968 GPATCH8Q9UKJ3 1502 aaKnown RBP11.18□□□□□ -0.62
CDH7-202ENST00000397968 EVCP57679 992 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 ATP2B3Q16720 1220 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 ASIC1P78348 528 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 RRP36Q96EU6 259 aaKnown RBP11.18□□□□□ -0.62
CDH7-202ENST00000397968 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 CCDC122Q5T0U0 273 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 SEL1L2Q5TEA6 688 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 ISM2Q6H9L7 571 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 LMNTD2Q8IXW0 634 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
CDH7-202ENST00000397968 ZNF569Q5MCW4 686 aa11.18□□□□□ -0.62
CDH7-202ENST00000397968 FEZ2Q9UHY8 353 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms