RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 AOX1Q06278 1338 aa20.63■□□□□ 0.89
CUX2-202ENST00000397643 MPHOSPH8Q99549 860 aa20.63■□□□□ 0.89
CUX2-202ENST00000397643 RBBP6Q7Z6E9 1792 aaKnown RBP20.63■□□□□ 0.89
CUX2-202ENST00000397643 KIAA0100Q14667 2235 aaKnown RBP20.63■□□□□ 0.89
CUX2-202ENST00000397643 INHBEP58166 350 aa20.62■□□□□ 0.89
CUX2-202ENST00000397643 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
CUX2-202ENST00000397643 C15orf52Q6ZUT6 534 aaKnown RBP20.62■□□□□ 0.89
CUX2-202ENST00000397643 SLC10A4Q96EP9 437 aa20.62■□□□□ 0.89
CUX2-202ENST00000397643 TRIM17Q9Y577 477 aa20.62■□□□□ 0.89
CUX2-202ENST00000397643 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
CUX2-202ENST00000397643 POTEFA5A3E0 1075 aa20.61■□□□□ 0.89
CUX2-202ENST00000397643 GJA5P36382 358 aa20.61■□□□□ 0.89
CUX2-202ENST00000397643 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
CUX2-202ENST00000397643 OTOFQ9HC10 1997 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 SPDYE2BA6NHP3 402 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 SPDYE6P0CI01 402 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 KCNJ4P48050 445 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 FLIIQ13045 1269 aa20.6■□□□□ 0.89
CUX2-202ENST00000397643 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 UNCXA6NJT0 531 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 TAF5LO75529 589 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 IL1R1P14778 569 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 CAP1Q01518 475 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
CUX2-202ENST00000397643 PRMT6Q96LA8 375 aaPredicted RBP20.59■□□□□ 0.89
CUX2-202ENST00000397643 PPP1R12BO60237 982 aaPredicted RBP20.58■□□□□ 0.89
CUX2-202ENST00000397643 FKBP1AP62942 108 aaKnown RBP20.58■□□□□ 0.89
CUX2-202ENST00000397643 CRHR2Q13324 411 aa20.58■□□□□ 0.89
CUX2-202ENST00000397643 NBPF12Q5TAG4 269 aaPredicted RBP20.58■□□□□ 0.89
CUX2-202ENST00000397643 HELBQ8NG08 1087 aaPredicted RBP20.58■□□□□ 0.89
CUX2-202ENST00000397643 LINS1Q8NG48 757 aa20.58■□□□□ 0.89
CUX2-202ENST00000397643 DNAAF4Q8WXU2 420 aa20.58■□□□□ 0.89
CUX2-202ENST00000397643 ANKRD18BA2A2Z9 1011 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 F8W031 263 aaPredicted RBP20.57■□□□□ 0.88
CUX2-202ENST00000397643 CCDC27Q2M243 656 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 INTS3Q68E01 1043 aaKnown RBP20.57■□□□□ 0.88
CUX2-202ENST00000397643 CD99L2Q8TCZ2 262 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 GCC1Q96CN9 775 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 PTPN18Q99952 460 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.57■□□□□ 0.88
CUX2-202ENST00000397643 PTPN22Q9Y2R2 807 aa20.57■□□□□ 0.88
CUX2-202ENST00000397643 USP2O75604 605 aaPredicted RBP20.56■□□□□ 0.88
CUX2-202ENST00000397643 FOXO4P98177 505 aa20.56■□□□□ 0.88
CUX2-202ENST00000397643 SUPT20HL1Q3ZLR7 823 aa20.56■□□□□ 0.88
CUX2-202ENST00000397643 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
CUX2-202ENST00000397643 ERO1AQ96HE7 468 aa20.56■□□□□ 0.88
CUX2-202ENST00000397643 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
CUX2-202ENST00000397643 TESPA1A2RU30 521 aaPredicted RBP20.55■□□□□ 0.88
CUX2-202ENST00000397643 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
CUX2-202ENST00000397643 HABP4Q5JVS0 413 aaKnown RBP20.55■□□□□ 0.88
CUX2-202ENST00000397643 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
CUX2-202ENST00000397643 VEZTQ9HBM0 779 aa20.55■□□□□ 0.88
CUX2-202ENST00000397643 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
CUX2-202ENST00000397643 MYO1BO43795 1136 aa20.54■□□□□ 0.88
CUX2-202ENST00000397643 RASA3Q14644 834 aa20.54■□□□□ 0.88
CUX2-202ENST00000397643 ZNF804AQ7Z570 1209 aa20.54■□□□□ 0.88
CUX2-202ENST00000397643 IREB2P48200 963 aaKnown RBP20.53■□□□□ 0.88
CUX2-202ENST00000397643 IFIT5Q13325 482 aaKnown RBP20.53■□□□□ 0.88
CUX2-202ENST00000397643 CDAN1Q8IWY9 1227 aa20.53■□□□□ 0.88
CUX2-202ENST00000397643 ANKRD13AQ8IZ07 590 aa20.53■□□□□ 0.88
CUX2-202ENST00000397643 EFCC1Q9HA90 598 aa20.52■□□□□ 0.88
CUX2-202ENST00000397643 ARAP2Q8WZ64 1704 aa20.52■□□□□ 0.88
CUX2-202ENST00000397643 IL16Q14005 1332 aa20.52■□□□□ 0.87
CUX2-202ENST00000397643 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
CUX2-202ENST00000397643 ANP32CO43423 234 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 SP3Q02447 781 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 SPDYE2Q495Y8 402 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 EPHA10Q5JZY3 1008 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 DIEXFQ68CQ4 756 aaKnown RBP20.51■□□□□ 0.87
CUX2-202ENST00000397643 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 TEPSINQ96N21 525 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
CUX2-202ENST00000397643 EN2P19622 333 aaPredicted RBP20.5■□□□□ 0.87
CUX2-202ENST00000397643 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
CUX2-202ENST00000397643 OPTNQ96CV9 577 aa20.5■□□□□ 0.87
CUX2-202ENST00000397643 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
CUX2-202ENST00000397643 ELP3Q9H9T3 547 aa20.5■□□□□ 0.87
CUX2-202ENST00000397643 BEND3Q5T5X7 828 aa20.49■□□□□ 0.87
CUX2-202ENST00000397643 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
CUX2-202ENST00000397643 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.49■□□□□ 0.87
CUX2-202ENST00000397643 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
CUX2-202ENST00000397643 ZNF333Q96JL9 665 aa20.49■□□□□ 0.87
CUX2-202ENST00000397643 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
CUX2-202ENST00000397643 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
CUX2-202ENST00000397643 F6X3S4 739 aa20.48■□□□□ 0.87
CUX2-202ENST00000397643 VAMP4O75379 141 aa20.48■□□□□ 0.87
CUX2-202ENST00000397643 RBM5P52756 815 aaKnown RBP eCLIP20.48■□□□□ 0.87
CUX2-202ENST00000397643 MFSD14BQ5SR56 506 aa20.48■□□□□ 0.87
CUX2-202ENST00000397643 TDRD7Q8NHU6 1098 aaKnown RBP20.48■□□□□ 0.87
CUX2-202ENST00000397643 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
CUX2-202ENST00000397643 SERPINA10Q9UK55 444 aa20.48■□□□□ 0.87
CUX2-202ENST00000397643 TNFAIP1Q13829 316 aa20.47■□□□□ 0.87
CUX2-202ENST00000397643 TDRD3Q9H7E2 651 aaKnown RBP20.47■□□□□ 0.87
CUX2-202ENST00000397643 CEP290O15078 2479 aa20.46■□□□□ 0.87
CUX2-202ENST00000397643 VGLL4Q14135 290 aa20.46■□□□□ 0.87
CUX2-202ENST00000397643 LDHAL6AQ6ZMR3 332 aa20.46■□□□□ 0.87
CUX2-202ENST00000397643 TTF2Q9UNY4 1162 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms