RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ATP5JP18859 108 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 ADORA1P30542 326 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 NOM1Q5C9Z4 860 aaKnown RBP5.84□□□□□ -1.47
SSR1-202ENST00000397511 SYT10Q6XYQ8 523 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 CCDC186Q7Z3E2 898 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 C10orf67Q8IYJ2 551 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 GTF3C6Q969F1 213 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 DCAF5Q96JK2 942 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 COPRSQ9NQ92 184 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 PRDM11Q9NQV5 511 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 MED23Q9ULK4 1368 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 MYO1CO00159 1063 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 PDCP20941 246 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 ANKRD1Q15327 319 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 KRBA2Q6ZNG9 492 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 LRP10Q7Z4F1 713 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 IL17RAQ96F46 866 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 FUCA2Q9BTY2 467 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 CBX8Q9HC52 389 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 ZNF215Q9UL58 517 aaPredicted RBP5.84□□□□□ -1.47
SSR1-202ENST00000397511 DENND2AQ9ULE3 1009 aa5.84□□□□□ -1.47
SSR1-202ENST00000397511 UTYO14607 1347 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 PTPDC1A2A3K4 754 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 EPB41L2O43491 1005 aaKnown RBP5.84□□□□□ -1.48
SSR1-202ENST00000397511 ME1P48163 572 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 ZNF165P49910 485 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 SCARF1Q14162 830 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 ARID5BQ14865 1188 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 ELF2Q15723 593 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 BANK1Q8NDB2 785 aa5.84□□□□□ -1.48
SSR1-202ENST00000397511 MED1Q15648 1581 aaPredicted RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 CHD2O14647 1828 aaKnown RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 M0R2C6 588 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 SNAP23O00161 211 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 HSPD1P10809 573 aaKnown RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 FOXO4P98177 505 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 CC2D2BQ6DHV5 1058 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 ATG9AQ7Z3C6 839 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 FILIP1Q7Z7B0 1213 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 KBTBD3Q8NAB2 608 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 CCDC191Q8NCU4 936 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 SCAND2PQ9GZW5 306 aaPredicted RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 CWC25Q9NXE8 425 aaPredicted RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 TMEM94Q12767 1356 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 A0A1B0GVL5 298 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 E7EWF7 191 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 BIN1O00499 593 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 CLSTN1O94985 981 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 PTPN21Q16825 1174 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 CCDC57Q2TAC2 916 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 CNPY4Q8N129 248 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 HELBQ8NG08 1087 aaPredicted RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 NEK11Q8NG66 645 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 PLBD2Q8NHP8 589 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 FAM200AQ8TCP9 573 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 OSBP2Q969R2 916 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 USP28Q96RU2 1077 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 HAUS7Q99871 368 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 INCENPQ9NQS7 918 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.83□□□□□ -1.48
SSR1-202ENST00000397511 V9GYY5 206 aaPredicted RBP5.83□□□□□ -1.48
SSR1-202ENST00000397511 C5P01031 1676 aa5.83□□□□□ -1.48
SSR1-202ENST00000397511 SLU7O95391 586 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 CTDNEP1O95476 244 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 EVA1CP58658 441 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 C11orf57Q6ZUT1 292 aaPredicted RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 CCAR1Q8IX12 1150 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 CCDC82Q8N4S0 544 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 KCNB2Q92953 911 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 CEP83Q9Y592 693 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 C1orf167Q5SNV9 1468 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 LMO7Q8WWI1 1683 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 MAST3O60307 1309 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 PTPN14Q15678 1187 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ZSCAN26Q16670 478 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 TTC39AQ5SRH9 613 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 TMED8Q6PL24 325 aaPredicted RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 DHX32Q7L7V1 743 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 GPATCH11Q8N954 259 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 NSUN7Q8NE18 718 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 ZCRB1Q8TBF4 217 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 PUS7LQ9H0K6 701 aaKnown RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 GOLPH3LQ9H4A5 285 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 DEF6Q9H4E7 631 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ZNF446Q9NWS9 450 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 HMG20BQ9P0W2 317 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 JRKLQ9Y4A0 524 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 U3KPZ7 1027 aaPredicted RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 TRIM66O15016 1216 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 CCDC172P0C7W6 258 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ZAP70P43403 619 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 RESTQ13127 1097 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 KRT32Q14532 448 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 HSP90AA4PQ58FG1 418 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ZSCAN25Q6NSZ9 544 aa5.82□□□□□ -1.48
SSR1-202ENST00000397511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.82□□□□□ -1.48
SSR1-202ENST00000397511 NKX2-3Q8TAU0 364 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms