RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 MPNDQ8N594 471 aa20.62■□□□□ 0.89
TSPAN4-205ENST00000397406 MAP4K4O95819 1239 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 ITGBL1O95965 494 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 ATP2B4P23634 1241 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 KLRK1P26718 216 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 ARID4AP29374 1257 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 EPS15P42566 896 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 DPP8Q6V1X1 898 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 HAUS7Q99871 368 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 GJA3Q9Y6H8 435 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 PASKQ96RG2 1323 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 SCN4AP35499 1836 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 YDJCA8MPS7 323 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 CXCL9Q07325 125 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 LDHDQ86WU2 507 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 JMYQ8N9B5 988 aa20.61■□□□□ 0.89
TSPAN4-205ENST00000397406 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 MYH7P12883 1935 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 UQCRFS1P1P0C7P4 283 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 BCAMP50895 628 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 SCARF1Q14162 830 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 EAPPQ56P03 285 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 C15orf52Q6ZUT6 534 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 NIM1KQ8IY84 436 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 FAM84BQ96KN1 310 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 BACH2Q9BYV9 841 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 VPS33BQ9H267 617 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 GGA1Q9UJY5 639 aa20.6■□□□□ 0.89
TSPAN4-205ENST00000397406 DOCK2Q92608 1830 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 UFL1O94874 794 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 MCAMP43121 646 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 GYG1P46976 350 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 TXNRD3Q86VQ6 643 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 TBC1D16Q8TBP0 767 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 NDUFB9Q9Y6M9 179 aa20.59■□□□□ 0.89
TSPAN4-205ENST00000397406 CDC45O75419 566 aa20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 FBXO33Q7Z6M2 555 aa20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 EVI5LQ96CN4 794 aa20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 EDC3Q96F86 508 aaKnown RBP20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 GPR101Q96P66 508 aaPredicted RBP20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 DNAJC2Q99543 621 aaKnown RBP20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 ZNRF3Q9ULT6 936 aa20.58■□□□□ 0.88
TSPAN4-205ENST00000397406 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 MAP1SQ66K74 1059 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 MED23Q9ULK4 1368 aa20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 PCNTO95613 3336 aa20.57■□□□□ 0.88
TSPAN4-205ENST00000397406 ZBTB22O15209 634 aa20.56■□□□□ 0.88
TSPAN4-205ENST00000397406 PI16Q6UXB8 463 aa20.56■□□□□ 0.88
TSPAN4-205ENST00000397406 TBC1D9Q6ZT07 1266 aa20.56■□□□□ 0.88
TSPAN4-205ENST00000397406 PAG1Q9NWQ8 432 aa20.56■□□□□ 0.88
TSPAN4-205ENST00000397406 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-205ENST00000397406 FMR1Q06787 632 aaKnown RBP eCLIP20.55■□□□□ 0.88
TSPAN4-205ENST00000397406 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
TSPAN4-205ENST00000397406 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
TSPAN4-205ENST00000397406 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
TSPAN4-205ENST00000397406 SHTN1A0MZ66 631 aa20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 RAD17O75943 681 aa20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 ZAP70P43403 619 aa20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 KCNQ5Q9NR82 932 aa20.54■□□□□ 0.88
TSPAN4-205ENST00000397406 GOLIM4O00461 696 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 VPS37DQ86XT2 251 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 CREBZFQ9NS37 354 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 RFX7Q2KHR2 1363 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 CHMLP26374 656 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 CLEC11AQ9Y240 323 aa20.53■□□□□ 0.88
TSPAN4-205ENST00000397406 RIMBP2O15034 1052 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 SEMA3EO15041 775 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 CIAPIN1Q6FI81 312 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 ZNF804AQ7Z570 1209 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 FSD1Q9BTV5 496 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 DBNDD1Q9H9R9 158 aa20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 IQSEC3Q9UPP2 1182 aaPredicted RBP20.52■□□□□ 0.87
TSPAN4-205ENST00000397406 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
TSPAN4-205ENST00000397406 SEC24BO95487 1268 aa20.51■□□□□ 0.87
TSPAN4-205ENST00000397406 HIRAP54198 1017 aaPredicted RBP20.51■□□□□ 0.87
TSPAN4-205ENST00000397406 WASHC4Q2M389 1173 aa20.51■□□□□ 0.87
TSPAN4-205ENST00000397406 DOK7Q18PE1 504 aa20.5■□□□□ 0.87
TSPAN4-205ENST00000397406 TICAM2Q86XR7 235 aa20.5■□□□□ 0.87
TSPAN4-205ENST00000397406 TDRD7Q8NHU6 1098 aaKnown RBP20.5■□□□□ 0.87
TSPAN4-205ENST00000397406 EYA3Q99504 573 aa20.5■□□□□ 0.87
TSPAN4-205ENST00000397406 DENND2AQ9ULE3 1009 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms