RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ZGPATQ8N5A5 531 aaKnown RBP28.55■■■□□ 2.16
TSPAN4-202ENST00000397396 TAOK3Q9H2K8 898 aa28.55■■■□□ 2.16
TSPAN4-202ENST00000397396 SNRKQ9NRH2 765 aa28.55■■■□□ 2.16
TSPAN4-202ENST00000397396 LTBP3Q9NS15 1303 aa28.55■■■□□ 2.16
TSPAN4-202ENST00000397396 RIMBP2O15034 1052 aa28.54■■■□□ 2.16
TSPAN4-202ENST00000397396 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.54■■■□□ 2.16
TSPAN4-202ENST00000397396 MYH13Q9UKX3 1938 aa28.54■■■□□ 2.16
TSPAN4-202ENST00000397396 ZSCAN25Q6NSZ9 544 aa28.53■■■□□ 2.16
TSPAN4-202ENST00000397396 PODNQ7Z5L7 613 aa28.53■■■□□ 2.16
TSPAN4-202ENST00000397396 WDR66Q8TBY9 1149 aa28.53■■■□□ 2.16
TSPAN4-202ENST00000397396 PPIP5K2O43314 1243 aa28.52■■■□□ 2.16
TSPAN4-202ENST00000397396 DIAPH3Q9NSV4 1193 aa28.52■■■□□ 2.16
TSPAN4-202ENST00000397396 FER1L6Q2WGJ9 1857 aa28.52■■■□□ 2.16
TSPAN4-202ENST00000397396 CYP2E1P05181 493 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 ZFYP08048 801 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 C8orf34Q49A92 452 aa28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 TMED8Q6PL24 325 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 PI16Q6UXB8 463 aa28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 TBC1D22AQ8WUA7 517 aa28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 WWC3Q9ULE0 1092 aa28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 IQSEC3Q9UPP2 1182 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 SALL1Q9NSC2 1324 aa28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 COL1A1P02452 1464 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-202ENST00000397396 TBC1D9Q6ZT07 1266 aa28.5■■■□□ 2.15
TSPAN4-202ENST00000397396 RUFY2Q8WXA3 655 aa28.5■■■□□ 2.15
TSPAN4-202ENST00000397396 EDC3Q96F86 508 aaKnown RBP28.5■■■□□ 2.15
TSPAN4-202ENST00000397396 NDUFB9Q9Y6M9 179 aa28.5■■■□□ 2.15
TSPAN4-202ENST00000397396 MAP3K12Q12852 859 aa28.49■■■□□ 2.15
TSPAN4-202ENST00000397396 AOC3Q16853 763 aa28.49■■■□□ 2.15
TSPAN4-202ENST00000397396 SPTY2D1Q68D10 685 aaPredicted RBP28.49■■■□□ 2.15
TSPAN4-202ENST00000397396 CHMLP26374 656 aa28.48■■■□□ 2.15
TSPAN4-202ENST00000397396 CHAF1AQ13111 956 aaPredicted RBP28.48■■■□□ 2.15
TSPAN4-202ENST00000397396 LARGE2Q8N3Y3 721 aa28.48■■■□□ 2.15
TSPAN4-202ENST00000397396 ANTXR1Q9H6X2 564 aa28.48■■■□□ 2.15
TSPAN4-202ENST00000397396 FAM205AQ6ZU69 1335 aa28.48■■■□□ 2.15
TSPAN4-202ENST00000397396 IARSP41252 1262 aaKnown RBP28.47■■■□□ 2.15
TSPAN4-202ENST00000397396 ECE2O60344 883 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 IDH1O75874 414 aaKnown RBP28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 DOK7Q18PE1 504 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 DOCK2Q92608 1830 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 RAD50Q92878 1312 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 BACH2Q9BYV9 841 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 PIH1D3Q9NQM4 214 aaKnown RBP28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 ZNF277Q9NRM2 450 aaPredicted RBP28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 LRP2BPQ9P2M1 347 aa28.46■■■□□ 2.15
TSPAN4-202ENST00000397396 NFKBIEO00221 500 aa28.45■■■□□ 2.15
TSPAN4-202ENST00000397396 ABCF2Q9UG63 623 aa28.45■■■□□ 2.15
TSPAN4-202ENST00000397396 RNF113AO15541 343 aaKnown RBP28.44■■■□□ 2.14
TSPAN4-202ENST00000397396 ERICH6Q7L0X2 663 aa28.44■■■□□ 2.14
TSPAN4-202ENST00000397396 NIM1KQ8IY84 436 aa28.44■■■□□ 2.14
TSPAN4-202ENST00000397396 DBNDD1Q9H9R9 158 aa28.44■■■□□ 2.14
TSPAN4-202ENST00000397396 SUGT1Q9Y2Z0 365 aa28.44■■■□□ 2.14
TSPAN4-202ENST00000397396 FKBP1AP62942 108 aaKnown RBP28.43■■■□□ 2.14
TSPAN4-202ENST00000397396 JDP2Q8WYK2 163 aa28.43■■■□□ 2.14
TSPAN4-202ENST00000397396 MYH7P12883 1935 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 GTF2IP78347 998 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 UBE3CQ15386 1083 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 SLC9C2Q5TAH2 1124 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 STRIP1Q5VSL9 837 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 TTLL5Q6EMB2 1281 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 HELLSQ9NRZ9 838 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 RAI14Q9P0K7 980 aa28.42■■■□□ 2.14
TSPAN4-202ENST00000397396 MAST2Q6P0Q8 1798 aa28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 REC8O95072 547 aa28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 LDHBP07195 334 aaKnown RBP28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 ADD2P35612 726 aa28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 MFAP1P55081 439 aaKnown RBP28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 ESYT1Q9BSJ8 1104 aa28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 UPF2Q9HAU5 1272 aaKnown RBP28.41■■■□□ 2.14
TSPAN4-202ENST00000397396 USP17L3A6NCW0 530 aa28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 USP17L4A6NCW7 530 aa28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 MFSD14BQ5SR56 506 aa28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 CWC27Q6UX04 472 aaKnown RBP28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 USP17L1Q7RTZ2 530 aa28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 APPBP2Q92624 585 aa28.4■■■□□ 2.14
TSPAN4-202ENST00000397396 MAST3O60307 1309 aa28.39■■■□□ 2.14
TSPAN4-202ENST00000397396 PDE6AP16499 860 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 GSTO1P78417 241 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 NMIQ13287 307 aaPredicted RBP28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 ZMYM1Q5SVZ6 1142 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 ARHGAP27Q6ZUM4 889 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 FBXW7Q969H0 707 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 ZNRF3Q9ULT6 936 aa28.39■■■□□ 2.13
TSPAN4-202ENST00000397396 MYO3BQ8WXR4 1341 aa28.38■■■□□ 2.13
TSPAN4-202ENST00000397396 DZIP1Q86YF9 867 aaKnown RBP28.38■■■□□ 2.13
TSPAN4-202ENST00000397396 SLF2Q8IX21 1173 aa28.38■■■□□ 2.13
TSPAN4-202ENST00000397396 SGSM2O43147 1006 aa28.37■■■□□ 2.13
TSPAN4-202ENST00000397396 RASSF7Q02833 373 aa28.37■■■□□ 2.13
TSPAN4-202ENST00000397396 MCMDC2Q4G0Z9 681 aa28.37■■■□□ 2.13
TSPAN4-202ENST00000397396 MAGEB6Q8N7X4 407 aa28.37■■■□□ 2.13
TSPAN4-202ENST00000397396 EPB41L2O43491 1005 aaKnown RBP28.36■■■□□ 2.13
TSPAN4-202ENST00000397396 NAA16Q6N069 864 aaPredicted RBP28.36■■■□□ 2.13
TSPAN4-202ENST00000397396 JAG2Q9Y219 1238 aa28.36■■■□□ 2.13
TSPAN4-202ENST00000397396 ZNF532Q9HCE3 1301 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 CCDC88AQ3V6T2 1871 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 A0A0D9SFI3 127 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 GRIN3BO60391 1043 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 LMNB1P20700 586 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 PRDX5P30044 214 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 KIAA1211Q6ZU35 1233 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms