RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LACTBP83111 547 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-203ENST00000397378 CCL15Q16663 113 aa12.25□□□□□ -0.45
NEDD9-203ENST00000397378 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
NEDD9-203ENST00000397378 SUPT20HL1Q3ZLR7 823 aa12.25□□□□□ -0.45
NEDD9-203ENST00000397378 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
NEDD9-203ENST00000397378 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
NEDD9-203ENST00000397378 ECM29Q5VYK3 1845 aa12.25□□□□□ -0.45
NEDD9-203ENST00000397378 GNRH1P01148 92 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 HSP90B1P14625 803 aaKnown RBP12.24□□□□□ -0.45
NEDD9-203ENST00000397378 MMP14P50281 582 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 STRIP1Q5VSL9 837 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 FAM43AQ8N2R8 423 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
NEDD9-203ENST00000397378 PPP2R3BQ9Y5P8 575 aa12.24□□□□□ -0.45
NEDD9-203ENST00000397378 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
NEDD9-203ENST00000397378 USP2O75604 605 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-203ENST00000397378 GRK4P32298 578 aa12.23□□□□□ -0.45
NEDD9-203ENST00000397378 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
NEDD9-203ENST00000397378 NBPF12Q5TAG4 269 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-203ENST00000397378 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
NEDD9-203ENST00000397378 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
NEDD9-203ENST00000397378 CLRN2A0PK11 232 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 TLR2O60603 784 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 COL9A1P20849 921 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 BCAMP50895 628 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 GTF2A2P52657 109 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 UBXN2AP68543 259 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
NEDD9-203ENST00000397378 ZBED3Q96IU2 234 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-203ENST00000397378 CCDC85AQ96PX6 553 aaPredicted RBP12.22□□□□□ -0.45
NEDD9-203ENST00000397378 VEZTQ9HBM0 779 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
NEDD9-203ENST00000397378 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 MYO1BO43795 1136 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 BMP8BP34820 402 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 CCDC152Q4G0S7 254 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 CNKSR2Q8WXI2 1034 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 TRIM47Q96LD4 638 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 GDF15Q99988 308 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 COA1Q9GZY4 146 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 SRRDQ9UH36 339 aa12.21□□□□□ -0.45
NEDD9-203ENST00000397378 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
NEDD9-203ENST00000397378 RPTORQ8N122 1335 aa12.2□□□□□ -0.46
NEDD9-203ENST00000397378 PDE8AO60658 829 aa12.2□□□□□ -0.46
NEDD9-203ENST00000397378 HOXD10P28358 340 aa12.2□□□□□ -0.46
NEDD9-203ENST00000397378 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
NEDD9-203ENST00000397378 TRIM35Q9UPQ4 493 aa12.2□□□□□ -0.46
NEDD9-203ENST00000397378 MYPNQ86TC9 1320 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 PCCAP05165 728 aaPredicted RBP12.19□□□□□ -0.46
NEDD9-203ENST00000397378 OSBPP22059 807 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 PSMC4P43686 418 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 GTF2IP78347 998 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 C7orf61Q8IZ16 206 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 TDHQ8IZJ6 230 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 LAS1LQ9Y4W2 734 aaKnown RBP12.19□□□□□ -0.46
NEDD9-203ENST00000397378 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
NEDD9-203ENST00000397378 FMNL1O95466 1100 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-203ENST00000397378 SGPL1O95470 568 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
NEDD9-203ENST00000397378 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 RASA3Q14644 834 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
NEDD9-203ENST00000397378 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
NEDD9-203ENST00000397378 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 EYSQ5T1H1 3165 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-203ENST00000397378 CTGFP29279 349 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
NEDD9-203ENST00000397378 VGLL4Q14135 290 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 RALBP1Q15311 655 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-203ENST00000397378 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-203ENST00000397378 CPA4Q9UI42 421 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 CSADQ9Y600 493 aa12.17□□□□□ -0.46
NEDD9-203ENST00000397378 SPTBN5Q9NRC6 3674 aaKnown RBP12.17□□□□□ -0.46
NEDD9-203ENST00000397378 BTBD19C9JJ37 291 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 CETPP11597 493 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 SYN1P17600 705 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 CFAP100Q494V2 611 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 PAWRQ96IZ0 340 aaKnown RBP12.16□□□□□ -0.46
NEDD9-203ENST00000397378 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
NEDD9-203ENST00000397378 MYD88Q99836 296 aa12.16□□□□□ -0.46
NEDD9-203ENST00000397378 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
NEDD9-203ENST00000397378 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
NEDD9-203ENST00000397378 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms