RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
CAPN3-206ENST00000397163 NEURL1BA8MQ27 555 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 DHX16O60231 1041 aaKnown RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 AMOTQ4VCS5 1084 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 OTUD7BQ6GQQ9 843 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 TSPYL1Q9H0U9 437 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 ARGLU1Q9NWB6 273 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 POLR3DP05423 398 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 GCKRQ14397 625 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-206ENST00000397163 GPATCH11Q8N954 259 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 ISM2Q6H9L7 571 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 TMCO3Q6UWJ1 677 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 EP400NLQ6ZTU2 488 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 HAUS7Q99871 368 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 COPRSQ9NQ92 184 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 RTEL1Q9NZ71 1219 aa10.62□□□□□ -0.71
CAPN3-206ENST00000397163 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 A0A1W2PQD8 194 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 PDIA3P30101 505 aaKnown RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 ETF1P62495 437 aaKnown RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 ZSCAN26Q16670 478 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 CCDC93Q567U6 631 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 CREBRFQ8IUR6 639 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 XAGE3Q8WTP9 111 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 ZNF335Q9H4Z2 1342 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 MED1Q15648 1581 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 URI1O94763 535 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 TUBB4AP04350 444 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 FAM193AP78312 1265 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 DHX8Q14562 1220 aaKnown RBP10.61□□□□□ -0.71
CAPN3-206ENST00000397163 KBTBD3Q8NAB2 608 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 CLIC4Q9Y696 253 aa10.61□□□□□ -0.71
CAPN3-206ENST00000397163 GOLIM4O00461 696 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 CCP110O43303 1012 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 OAS2P29728 719 aaKnown RBP10.6□□□□□ -0.71
CAPN3-206ENST00000397163 NOP2P46087 812 aaKnown RBP10.6□□□□□ -0.71
CAPN3-206ENST00000397163 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
CAPN3-206ENST00000397163 COPS6Q7L5N1 327 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 LINC00301Q8NCQ3 95 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 KCNG4Q8TDN1 519 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 NEUROD6Q96NK8 337 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 CARMIL3Q8ND23 1372 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 NCAPD2Q15021 1401 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 E7EWF7 191 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 SPTLC2O15270 562 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 NLRP12P59046 1061 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 FANCCQ00597 558 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 EXOSC10Q01780 885 aaKnown RBP10.6□□□□□ -0.71
CAPN3-206ENST00000397163 SART3Q15020 963 aaKnown RBP10.6□□□□□ -0.71
CAPN3-206ENST00000397163 TEX35Q5T0J7 233 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 C8orf76Q96K31 380 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 BPIFA3Q9BQP9 254 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 ZNF202O95125 648 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 LMAN1P49257 510 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 SLC39A6Q13433 755 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 PDIA6Q15084 440 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 SYNE3Q6ZMZ3 975 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 UBE3BQ7Z3V4 1068 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
CAPN3-206ENST00000397163 RFX7Q2KHR2 1363 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 KCNJ6P48051 423 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 ZNF274Q96GC6 653 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 METTL22Q9BUU2 404 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 SH3TC1Q8TE82 1336 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 SALL1Q9NSC2 1324 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 SERPINC1P01008 464 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 ATP1A3P13637 1013 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 FDPSP14324 419 aaKnown RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 CARD6Q9BX69 1037 aa10.59□□□□□ -0.71
CAPN3-206ENST00000397163 RGPD8O14715 1765 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-206ENST00000397163 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 HEG1Q9ULI3 1381 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 RFX5P48382 616 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 UBASH3AP57075 661 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 NCAPHQ15003 741 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 CFAP100Q494V2 611 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 HELLSQ9NRZ9 838 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 SASH3O75995 380 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 YEATS4O95619 227 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 HSPD1P10809 573 aaKnown RBP10.58□□□□□ -0.72
CAPN3-206ENST00000397163 SKIDA1Q1XH10 827 aa10.58□□□□□ -0.72
CAPN3-206ENST00000397163 TXLNBQ8N3L3 684 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms