RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CCDC7Q96M83 1385 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 DCLK2Q8N568 766 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 TRIM31Q9BZY9 425 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 OGFOD1Q8N543 542 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 IRAK4Q9NWZ3 460 aa13.88□□□□□ -0.19
SMU1-201ENST00000397149 WTAPQ15007 396 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 CCDC42Q96M95 316 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 USTQ9Y2C2 406 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 SPDYE3A6NKU9 549 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 STX10O60499 249 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 SLC8A3P57103 927 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 LMNTD2Q8IXW0 634 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 CLNS1AP54105 237 aaKnown RBP13.87□□□□□ -0.19
SMU1-201ENST00000397149 MAEAQ7L5Y9 396 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 AFAP1L2Q8N4X5 818 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 RNF217Q8TC41 542 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 SKA2Q8WVK7 121 aaPredicted RBP13.87□□□□□ -0.19
SMU1-201ENST00000397149 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
SMU1-201ENST00000397149 SPOPO43791 374 aa13.87□□□□□ -0.19
SMU1-201ENST00000397149 MAFGO15525 162 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
SMU1-201ENST00000397149 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
SMU1-201ENST00000397149 GBP1P32455 592 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 TNNI2P48788 182 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 RILPQ96NA2 401 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PDE3AQ14432 1141 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 NXNQ6DKJ4 435 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 AOPEPQ8N6M6 819 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 ACRBPQ8NEB7 543 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 LPXNO60711 386 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 SKILP12757 684 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 FNBP1Q96RU3 617 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PSMA7O14818 248 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 ST5P78524 1137 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 CASP2P42575 452 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
SMU1-201ENST00000397149 ITM2BQ9Y287 266 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PAXBP1Q9Y5B6 917 aa13.86□□□□□ -0.19
SMU1-201ENST00000397149 PDZD8Q8NEN9 1154 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 TTC30BQ8N4P2 665 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 SYT1P21579 422 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 CCDC62Q6P9F0 684 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 NCOA7Q8NI08 942 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 ALG1Q9BT22 464 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 CCDC169A6NNP5 214 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 CHMP2AO43633 222 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 PLCB4Q15147 1175 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 GPR161Q8N6U8 529 aaKnown RBP13.85□□□□□ -0.19
SMU1-201ENST00000397149 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 JAG2Q9Y219 1238 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 CYP7A1P22680 504 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 HS2ST1Q7LGA3 356 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 TACO1Q9BSH4 297 aaKnown RBP13.85□□□□□ -0.19
SMU1-201ENST00000397149 VCXQ9H320 206 aa13.85□□□□□ -0.19
SMU1-201ENST00000397149 GPHNQ9NQX3 736 aaPredicted RBP13.85□□□□□ -0.19
SMU1-201ENST00000397149 VPS41P49754 854 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 WDR44Q5JSH3 913 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 FNBP4Q8N3X1 1017 aaPredicted RBP13.84□□□□□ -0.19
SMU1-201ENST00000397149 PARD3BQ8TEW8 1205 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 NSMCE1Q8WV22 266 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 POMGNT1Q8WZA1 660 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 CDC5LQ99459 802 aaKnown RBP13.84□□□□□ -0.19
SMU1-201ENST00000397149 KRT86O43790 486 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 COG7P83436 770 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 NAP1L4Q99733 375 aaKnown RBP13.84□□□□□ -0.19
SMU1-201ENST00000397149 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 MGARPQ8TDB4 240 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 STK10O94804 968 aaKnown RBP13.84□□□□□ -0.19
SMU1-201ENST00000397149 LMOD1P29536 600 aaPredicted RBP13.84□□□□□ -0.19
SMU1-201ENST00000397149 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 BACH2Q9BYV9 841 aa13.84□□□□□ -0.19
SMU1-201ENST00000397149 IFRD2Q12894 506 aaPredicted RBP13.83□□□□□ -0.19
SMU1-201ENST00000397149 FAM76AQ8TAV0 307 aa13.83□□□□□ -0.19
SMU1-201ENST00000397149 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 VAV2P52735 878 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 ANKRD35Q8N283 1001 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
SMU1-201ENST00000397149 DDX21Q9NR30 783 aaKnown RBP eCLIP13.83□□□□□ -0.2
SMU1-201ENST00000397149 HP1BP3Q5SSJ5 553 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms