RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 FBXW7Q969H0 707 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 WNK4Q96J92 1243 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 PTPN22Q9Y2R2 807 aa17.33■□□□□ 0.36
SEC13-205ENST00000397101 RBBP6Q7Z6E9 1792 aaKnown RBP17.33■□□□□ 0.36
SEC13-205ENST00000397101 IGF2BP3O00425 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEC13-205ENST00000397101 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
SEC13-205ENST00000397101 PRKG1Q13976 671 aa17.32■□□□□ 0.36
SEC13-205ENST00000397101 OTUD7BQ6GQQ9 843 aa17.32■□□□□ 0.36
SEC13-205ENST00000397101 TESPA1A2RU30 521 aaPredicted RBP17.31■□□□□ 0.36
SEC13-205ENST00000397101 PI4KAP2A4QPH2 592 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 H7C1W4 665 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
SEC13-205ENST00000397101 GTF2IP78347 998 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
SEC13-205ENST00000397101 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 SUPT20HL1Q3ZLR7 823 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
SEC13-205ENST00000397101 PI4KAP1Q8N8J0 262 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 CD209Q9NNX6 404 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 MYH3P11055 1940 aa17.31■□□□□ 0.36
SEC13-205ENST00000397101 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
SEC13-205ENST00000397101 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
SEC13-205ENST00000397101 TRMT2AQ8IZ69 625 aaKnown RBP17.3■□□□□ 0.36
SEC13-205ENST00000397101 SSC5DA1L4H1 1573 aa17.3■□□□□ 0.36
SEC13-205ENST00000397101 MYO1BO43795 1136 aa17.29■□□□□ 0.36
SEC13-205ENST00000397101 CSF1RP07333 972 aa17.29■□□□□ 0.36
SEC13-205ENST00000397101 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
SEC13-205ENST00000397101 EFCC1Q9HA90 598 aa17.29■□□□□ 0.36
SEC13-205ENST00000397101 IRS2Q9Y4H2 1338 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 ITGA6P23229 1130 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 KLRK1P26718 216 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 IREB2P48200 963 aaKnown RBP17.28■□□□□ 0.36
SEC13-205ENST00000397101 SP3Q02447 781 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 CRHR2Q13324 411 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
SEC13-205ENST00000397101 KIAA0100Q14667 2235 aaKnown RBP17.28■□□□□ 0.36
SEC13-205ENST00000397101 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 FXR1P51114 621 aaKnown RBP eCLIP17.27■□□□□ 0.36
SEC13-205ENST00000397101 ARHGEF6Q15052 776 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 ANKRD13AQ8IZ07 590 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 CD99L2Q8TCZ2 262 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 FZD1Q9UP38 647 aa17.27■□□□□ 0.36
SEC13-205ENST00000397101 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
SEC13-205ENST00000397101 IL1R1P14778 569 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 KCNJ4P48050 445 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 CASP7P55210 303 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 CHRNDQ07001 517 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 CWF19L2Q2TBE0 894 aaKnown RBP17.26■□□□□ 0.35
SEC13-205ENST00000397101 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
SEC13-205ENST00000397101 SZT2Q5T011 3432 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 EN2P19622 333 aaPredicted RBP17.25■□□□□ 0.35
SEC13-205ENST00000397101 GJA5P36382 358 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 TWISTNBQ3B726 338 aaPredicted RBP17.25■□□□□ 0.35
SEC13-205ENST00000397101 CFAP100Q494V2 611 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 ZNF333Q96JL9 665 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 PTPN18Q99952 460 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 ECM29Q5VYK3 1845 aa17.25■□□□□ 0.35
SEC13-205ENST00000397101 SPEF2Q9C093 1822 aa17.24■□□□□ 0.35
SEC13-205ENST00000397101 GCKRQ14397 625 aa17.24■□□□□ 0.35
SEC13-205ENST00000397101 NBPF12Q5TAG4 269 aaPredicted RBP17.24■□□□□ 0.35
SEC13-205ENST00000397101 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
SEC13-205ENST00000397101 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
SEC13-205ENST00000397101 PRMT6Q96LA8 375 aaPredicted RBP17.24■□□□□ 0.35
SEC13-205ENST00000397101 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
SEC13-205ENST00000397101 ZNF804AQ7Z570 1209 aa17.23■□□□□ 0.35
SEC13-205ENST00000397101 MS4A4AQ96JQ5 239 aa17.23■□□□□ 0.35
SEC13-205ENST00000397101 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
SEC13-205ENST00000397101 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
SEC13-205ENST00000397101 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
SEC13-205ENST00000397101 RASA3Q14644 834 aa17.22■□□□□ 0.35
SEC13-205ENST00000397101 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
SEC13-205ENST00000397101 CLRN2A0PK11 232 aa17.21■□□□□ 0.35
SEC13-205ENST00000397101 CAP1Q01518 475 aa17.21■□□□□ 0.35
SEC13-205ENST00000397101 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
SEC13-205ENST00000397101 PCDHAC2Q9Y5I4 1007 aa17.21■□□□□ 0.35
SEC13-205ENST00000397101 VAMP4O75379 141 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 LINS1Q8NG48 757 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 ZFYVE28Q9HCC9 887 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 FAM205AQ6ZU69 1335 aa17.2■□□□□ 0.34
SEC13-205ENST00000397101 F8W031 263 aaPredicted RBP17.19■□□□□ 0.34
SEC13-205ENST00000397101 GTF2A2P52657 109 aa17.19■□□□□ 0.34
SEC13-205ENST00000397101 SLC9C1Q4G0N8 1177 aa17.19■□□□□ 0.34
SEC13-205ENST00000397101 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
SEC13-205ENST00000397101 SNAP23O00161 211 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 TAF5LO75529 589 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
SEC13-205ENST00000397101 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
SEC13-205ENST00000397101 G2E3Q7L622 706 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
SEC13-205ENST00000397101 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms