RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 PSME4Q14997 1843 aa17.95■□□□□ 0.46
TM9SF1-202ENST00000396854 ZNF646O15015 1829 aaPredicted RBP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 MFAP1P55081 439 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 EVI5LQ96CN4 794 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 HMG20BQ9P0W2 317 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 IL1R1P14778 569 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 SPATA5Q8NB90 893 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 TDRD7Q8NHU6 1098 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 CD209Q9NNX6 404 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 DENND2AQ9ULE3 1009 aa17.94■□□□□ 0.46
TM9SF1-202ENST00000396854 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
TM9SF1-202ENST00000396854 COA1Q9GZY4 146 aa17.93■□□□□ 0.46
TM9SF1-202ENST00000396854 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
TM9SF1-202ENST00000396854 PAG1Q9NWQ8 432 aa17.93■□□□□ 0.46
TM9SF1-202ENST00000396854 CCDC88AQ3V6T2 1871 aa17.93■□□□□ 0.46
TM9SF1-202ENST00000396854 ZAP70P43403 619 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 KIAA2012Q0VF49 1180 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 PI16Q6UXB8 463 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 NDUFB9Q9Y6M9 179 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 LTBP3Q9NS15 1303 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 RFX7Q2KHR2 1363 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 RIMBP2O15034 1052 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 SNRKQ9NRH2 765 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 MAST2Q6P0Q8 1798 aa17.92■□□□□ 0.46
TM9SF1-202ENST00000396854 SCN9AQ15858 1988 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 GOLIM4O00461 696 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 IQSEC3Q9UPP2 1182 aaPredicted RBP17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 CDC45O75419 566 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 CYP2E1P05181 493 aaPredicted RBP17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 TICAM2Q86XR7 235 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 KBTBD3Q8NAB2 608 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 TAOK3Q9H2K8 898 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
TM9SF1-202ENST00000396854 DICER1Q9UPY3 1922 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-202ENST00000396854 NFKBIEO00221 500 aa17.9■□□□□ 0.46
TM9SF1-202ENST00000396854 RBM25P49756 843 aaKnown RBP17.9■□□□□ 0.46
TM9SF1-202ENST00000396854 TTF1Q15361 905 aaPredicted RBP17.9■□□□□ 0.46
TM9SF1-202ENST00000396854 AOC3Q16853 763 aa17.89■□□□□ 0.45
TM9SF1-202ENST00000396854 SBF1O95248 1867 aa17.89■□□□□ 0.45
TM9SF1-202ENST00000396854 COL4A5P29400 1685 aa17.89■□□□□ 0.45
TM9SF1-202ENST00000396854 PPIP5K2O43314 1243 aa17.89■□□□□ 0.45
TM9SF1-202ENST00000396854 PODNQ7Z5L7 613 aa17.89■□□□□ 0.45
TM9SF1-202ENST00000396854 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
TM9SF1-202ENST00000396854 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
TM9SF1-202ENST00000396854 FAM205AQ6ZU69 1335 aa17.88■□□□□ 0.45
TM9SF1-202ENST00000396854 SALL1Q9NSC2 1324 aa17.88■□□□□ 0.45
TM9SF1-202ENST00000396854 EIF5BO60841 1220 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 DOK7Q18PE1 504 aa17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 ZNF277Q9NRM2 450 aaPredicted RBP17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 WDR66Q8TBY9 1149 aa17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 PIH1D3Q9NQM4 214 aaKnown RBP17.87■□□□□ 0.45
TM9SF1-202ENST00000396854 G3V3G9 751 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 ECE2O60344 883 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 DBNDD1Q9H9R9 158 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 CHMP5Q9NZZ3 219 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 HIP1O00291 1037 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 CHMLP26374 656 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 SNX21Q969T3 373 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 SRCAPQ6ZRS2 3230 aa17.86■□□□□ 0.45
TM9SF1-202ENST00000396854 IGSF3O75054 1194 aa17.85■□□□□ 0.45
TM9SF1-202ENST00000396854 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
TM9SF1-202ENST00000396854 LRRFIP1Q32MZ4 808 aaKnown RBP17.85■□□□□ 0.45
TM9SF1-202ENST00000396854 LARGE2Q8N3Y3 721 aa17.85■□□□□ 0.45
TM9SF1-202ENST00000396854 ZGPATQ8N5A5 531 aaKnown RBP17.85■□□□□ 0.45
TM9SF1-202ENST00000396854 YBX3P16989 372 aaKnown RBP eCLIP17.84■□□□□ 0.458e-7■■□□□ 12.2
TM9SF1-202ENST00000396854 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
TM9SF1-202ENST00000396854 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
TM9SF1-202ENST00000396854 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.84■□□□□ 0.45
TM9SF1-202ENST00000396854 RASSF7Q02833 373 aa17.84■□□□□ 0.45
TM9SF1-202ENST00000396854 ZFYP08048 801 aaPredicted RBP17.83■□□□□ 0.45
TM9SF1-202ENST00000396854 MAP3K12Q12852 859 aa17.83■□□□□ 0.45
TM9SF1-202ENST00000396854 YDJCA8MPS7 323 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 IDH1O75874 414 aaKnown RBP17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 MCM4P33991 863 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 GTF2IP78347 998 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 NIM1KQ8IY84 436 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 ABCF2Q9UG63 623 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 JAG2Q9Y219 1238 aa17.83■□□□□ 0.44
TM9SF1-202ENST00000396854 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 ADD2P35612 726 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 PRELPP51888 382 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 FKBP1AP62942 108 aaKnown RBP17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 STRIP1Q5VSL9 837 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 SPTY2D1Q68D10 685 aaPredicted RBP17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 MYH2Q9UKX2 1941 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 TIAM2Q8IVF5 1701 aa17.82■□□□□ 0.44
TM9SF1-202ENST00000396854 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms