RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 KRT26Q7Z3Y9 468 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 FBXO33Q7Z6M2 555 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 MTMR14Q8NCE2 650 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 GLIS2Q9BZE0 524 aaPredicted RBP13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 COPRSQ9NQ92 184 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
NDUFA9-202ENST00000396655 GNAI2P04899 355 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 FGFR2P21802 821 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 SCARF1Q14162 830 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 PUM3Q15397 648 aaKnown RBP13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 USP48Q86UV5 1035 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 SULF1Q8IWU6 871 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 TLL2Q9Y6L7 1015 aa13.83□□□□□ -0.2
NDUFA9-202ENST00000396655 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 MS4A1P11836 297 aa13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 IL15P40933 162 aaPredicted RBP13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 SAPCD2Q86UD0 394 aa13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 LPIN2Q92539 896 aa13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 ABT1Q9ULW3 272 aaKnown RBP13.82□□□□□ -0.2
NDUFA9-202ENST00000396655 WNT10BO00744 389 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 ECE1P42892 770 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 GYG1P46976 350 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 VPS37DQ86XT2 251 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 MXD3Q9BW11 206 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 GGA3Q9NZ52 723 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 CEP126Q9P2H0 1117 aa13.81□□□□□ -0.2
NDUFA9-202ENST00000396655 SRGAP3O43295 1099 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 VEGFBP49765 207 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 FKBP1BP68106 108 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 FMR1Q06787 632 aaKnown RBP eCLIP13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 ANGEL2Q5VTE6 544 aaKnown RBP13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 DZIP1LQ8IYY4 767 aaKnown RBP13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 CERS5Q8N5B7 392 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 CLUAP1Q96AJ1 413 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 SUGT1Q9Y2Z0 365 aa13.8□□□□□ -0.2
NDUFA9-202ENST00000396655 SLC5A1P13866 664 aa13.79□□□□□ -0.2
NDUFA9-202ENST00000396655 NBPF9Q3BBW0 867 aa13.79□□□□□ -0.2
NDUFA9-202ENST00000396655 PRDM10Q9NQV6 1147 aa13.79□□□□□ -0.2
NDUFA9-202ENST00000396655 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
NDUFA9-202ENST00000396655 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 MAP2K2P36507 400 aa13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 DLGAP5Q15398 846 aa13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 MFSD14BQ5SR56 506 aa13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 APOBEC3FQ8IUX4 373 aaKnown RBP13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 WDR33Q9C0J8 1336 aaKnown RBP13.78□□□□□ -0.2
NDUFA9-202ENST00000396655 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 SEMA3EO15041 775 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 MYO1BO43795 1136 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 BCAMP50895 628 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 ATP2B3Q16720 1220 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 SIL1Q9H173 461 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
NDUFA9-202ENST00000396655 PDE4DIPQ5VU43 2346 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 FRAT2O75474 233 aaPredicted RBP13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 CDCA5Q96FF9 252 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 CAPNS2Q96L46 248 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
NDUFA9-202ENST00000396655 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 RLBP1P12271 317 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 CTCFP49711 727 aaPredicted RBP13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 HUNKP57058 714 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 CCDC102AQ96A19 550 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 ZNF408Q9H9D4 720 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 PA2G4Q9UQ80 394 aaKnown RBP13.75□□□□□ -0.21
NDUFA9-202ENST00000396655 MAST3O60307 1309 aa13.74□□□□□ -0.21
NDUFA9-202ENST00000396655 NF2P35240 595 aa13.74□□□□□ -0.21
NDUFA9-202ENST00000396655 LBX1P52954 281 aa13.74□□□□□ -0.21
NDUFA9-202ENST00000396655 NOGQ13253 232 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms