RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZSCAN16Q9H4T2 348 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-203ENST00000396547 FLT4P35916 1363 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 ERBB3P21860 1342 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 CAPN2P17655 700 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 STK38Q15208 465 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 PDILTQ8N807 584 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
TRIM39-203ENST00000396547 QTRT2Q9H974 415 aaKnown RBP11.44□□□□□ -0.58
TRIM39-203ENST00000396547 GJB4Q9NTQ9 266 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 A0A0G2JLW4 131 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 CTAGE5O15320 804 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 PLA2G4AP47712 749 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 NDUFA8P51970 172 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 ST5P78524 1137 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 TEX35Q5T0J7 233 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 SARM1Q6SZW1 724 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
TRIM39-203ENST00000396547 IGSF1Q8N6C5 1336 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 CAVIN2O95810 425 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 CYP21A2P08686 494 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 GSDMDP57764 484 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 KCNB2Q92953 911 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 SERPINC1P01008 464 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 HOXC9P31274 260 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 RIC3Q7Z5B4 369 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 ZNF396Q96N95 335 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-203ENST00000396547 ARGLU1Q9NWB6 273 aaPredicted RBP11.43□□□□□ -0.58
TRIM39-203ENST00000396547 PCDHA7Q9UN72 937 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 RREB1Q92766 1687 aa11.43□□□□□ -0.58
TRIM39-203ENST00000396547 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 KRBA2Q6ZNG9 492 aa11.42□□□□□ -0.58
TRIM39-203ENST00000396547 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
TRIM39-203ENST00000396547 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
TRIM39-203ENST00000396547 MARCKSP29966 332 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 ADD1P35611 737 aaKnown RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
TRIM39-203ENST00000396547 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 SKIDA1Q1XH10 827 aa11.42□□□□□ -0.58
TRIM39-203ENST00000396547 MRPS27Q92552 414 aaKnown RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 CDCA7Q9BWT1 371 aaPredicted RBP11.42□□□□□ -0.58
TRIM39-203ENST00000396547 KIF2AO00139 706 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 GRM8O00222 908 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 SLC3A2P08195 630 aaKnown RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 CYP2C19P33261 490 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 EVCP57679 992 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 TPM4P67936 248 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 NSUN7Q8NE18 718 aaKnown RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 IPO4Q8TEX9 1081 aaKnown RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 CLIC4Q9Y696 253 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 ADCY9O60503 1353 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 KRT32Q14532 448 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 NHSQ6T4R5 1651 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 WDR17Q8IZU2 1322 aa11.41□□□□□ -0.58
TRIM39-203ENST00000396547 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
TRIM39-203ENST00000396547 HAND2P61296 217 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 STOX1Q6ZVD7 989 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 CCDC125Q86Z20 511 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 SMARCE1Q969G3 411 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 ADAMTS2O95450 1211 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 CTDNEP1O95476 244 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 OAS2P29728 719 aaKnown RBP11.4□□□□□ -0.58
TRIM39-203ENST00000396547 ETF1P62495 437 aaKnown RBP11.4□□□□□ -0.58
TRIM39-203ENST00000396547 TFCP2Q12800 502 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 KSR2Q6VAB6 950 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
TRIM39-203ENST00000396547 UBASH3AP57075 661 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 GNG11P61952 73 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 FANCCQ00597 558 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 ENGASEQ8NFI3 743 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 DPF2Q92785 391 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 KAZALD1Q96I82 304 aa11.4□□□□□ -0.59
TRIM39-203ENST00000396547 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.4□□□□□ -0.59
TRIM39-203ENST00000396547 ORC3Q9UBD5 711 aaPredicted RBP11.4□□□□□ -0.59
TRIM39-203ENST00000396547 LMAN1P49257 510 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 RAD51AP2Q09MP3 1159 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 DBNDD2Q9BQY9 259 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 GOLIM4O00461 696 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 NBPF6Q5VWK0 638 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 IP6K1Q92551 441 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 NBPF4Q96M43 638 aa11.39□□□□□ -0.59
TRIM39-203ENST00000396547 SLC39A6Q13433 755 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms