RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 APOBRQ0VD83 1088 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ARID5BQ14865 1188 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 HLFQ16534 295 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ANKRD7Q92527 254 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 KIF20AO95235 890 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 VPS72Q15906 364 aa16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
CCHCR1-203ENST00000396268 GOLIM4O00461 696 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 STOX1Q6ZVD7 989 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 BECN2A8MW95 431 aa16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
CCHCR1-203ENST00000396268 STARD3NLO95772 234 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CASP7P55210 303 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC144BQ3MJ40 725 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 HAUS7Q99871 368 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TRMT1Q9NXH9 659 aaKnown RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 ITPK1Q13572 414 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 C11orf57Q6ZUT1 292 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
CCHCR1-203ENST00000396268 GPTP24298 496 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ERCC4Q92889 916 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ME1P48163 572 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 CCDC85AQ96PX6 553 aaPredicted RBP16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 USP28Q96RU2 1077 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 ST7Q9NRC1 585 aa16.41■□□□□ 0.22
CCHCR1-203ENST00000396268 PFKFB2O60825 505 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 TIMM10P62072 90 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
CCHCR1-203ENST00000396268 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 USP27XA6NNY8 438 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CAVIN2O95810 425 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 STX1AQ16623 288 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 LLPHQ9BRT6 129 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 SIK1P57059 783 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 FAM89AQ96GI7 184 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 PAG1Q9NWQ8 432 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 OGFRQ9NZT2 677 aa16.39■□□□□ 0.21
CCHCR1-203ENST00000396268 AFF2P51816 1311 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 CTDNEP1O95476 244 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 IQCB1Q15051 598 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 RABL6Q3YEC7 729 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TJP1Q07157 1748 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 H7C1W4 665 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 FOXO4P98177 505 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 FSIP1Q8NA03 581 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 RCOR1Q9UKL0 485 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 CTAGE5O15320 804 aa16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-203ENST00000396268 TCIRG1Q13488 830 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 CRKLP46109 303 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 LRRC8AQ8IWT6 810 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
CCHCR1-203ENST00000396268 E7EWF7 191 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SH3TC1Q8TE82 1336 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SNW1Q13573 536 aaKnown RBP16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 MAP3K15Q6ZN16 1313 aa16.36■□□□□ 0.21
CCHCR1-203ENST00000396268 SKILP12757 684 aa16.35■□□□□ 0.21
CCHCR1-203ENST00000396268 FAM160A1Q05DH4 1040 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms