RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 PPP1R1BQ9UD71 204 aaPredicted RBP10.68□□□□□ -0.7
CCR9-203ENST00000395963 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 MYH7P12883 1935 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 MAST3O60307 1309 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 A0A0G2JLW4 131 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 MCAMP43121 646 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 HMG20BQ9P0W2 317 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 MYO3BQ8WXR4 1341 aa10.68□□□□□ -0.7
CCR9-203ENST00000395963 GLIPR1L2Q4G1C9 344 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 BOLA2Q9H3K6 86 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 RPAP1Q9BWH6 1393 aaPredicted RBP10.67□□□□□ -0.7
CCR9-203ENST00000395963 MAP4K4O95819 1239 aaPredicted RBP10.67□□□□□ -0.7
CCR9-203ENST00000395963 MAP3K12Q12852 859 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 SLF2Q8IX21 1173 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 HELLSQ9NRZ9 838 aa10.67□□□□□ -0.7
CCR9-203ENST00000395963 REC8O95072 547 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 BCAMP50895 628 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 FSD1Q9BTV5 496 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 BACH2Q9BYV9 841 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 TAOK3Q9H2K8 898 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 GSTO1P78417 241 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 MRIQ9BWK5 157 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 UPF2Q9HAU5 1272 aaKnown RBP10.66□□□□□ -0.7
CCR9-203ENST00000395963 DIAPH3Q9NSV4 1193 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
CCR9-203ENST00000395963 ZC3H4Q9UPT8 1303 aaKnown RBP10.66□□□□□ -0.7
CCR9-203ENST00000395963 C21orf2O43822 256 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 CHMLP26374 656 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 GYG1P46976 350 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 RILPL2Q969X0 211 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
CCR9-203ENST00000395963 FHDC1Q9C0D6 1143 aaPredicted RBP10.65□□□□□ -0.7
CCR9-203ENST00000395963 ZNF646O15015 1829 aaPredicted RBP10.65□□□□□ -0.7
CCR9-203ENST00000395963 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
CCR9-203ENST00000395963 ZAP70P43403 619 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 STRIP1Q5VSL9 837 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
CCR9-203ENST00000395963 COL1A1P02452 1464 aaPredicted RBP10.65□□□□□ -0.71
CCR9-203ENST00000395963 G3V3G9 751 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 GOLIM4O00461 696 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 FRAT2O75474 233 aaPredicted RBP10.64□□□□□ -0.71
CCR9-203ENST00000395963 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
CCR9-203ENST00000395963 IARSP41252 1262 aaKnown RBP10.64□□□□□ -0.71
CCR9-203ENST00000395963 HDLBPQ00341 1268 aaKnown RBP10.64□□□□□ -0.71
CCR9-203ENST00000395963 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 TBC1D9Q6ZT07 1266 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 APPBP2Q92624 585 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 LDHCP07864 332 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
CCR9-203ENST00000395963 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
CCR9-203ENST00000395963 PPIP5K2O43314 1243 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 ADD2P35612 726 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 NT5C2P49902 561 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 SCARF1Q14162 830 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 ZMYM1Q5SVZ6 1142 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 TSHZ3Q63HK5 1081 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 ESYT1Q9BSJ8 1104 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 SGSM2O43147 1006 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 GNAT2P19087 354 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 NIM1KQ8IY84 436 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 FAM163AQ96GL9 167 aaPredicted RBP10.63□□□□□ -0.71
CCR9-203ENST00000395963 BCS1LQ9Y276 419 aa10.63□□□□□ -0.71
CCR9-203ENST00000395963 ECE2O60344 883 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 GRIN3BO60391 1043 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 KLRK1P26718 216 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 TXNRD3Q86VQ6 643 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 SKAP1Q86WV1 359 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 NLGN2Q8NFZ4 835 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 LDHBP07195 334 aaKnown RBP10.62□□□□□ -0.71
CCR9-203ENST00000395963 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
CCR9-203ENST00000395963 JDP2Q8WYK2 163 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 LRP2BPQ9P2M1 347 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 ZNRF3Q9ULT6 936 aa10.62□□□□□ -0.71
CCR9-203ENST00000395963 USP17L3A6NCW0 530 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 USP17L4A6NCW7 530 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 SNAP23O00161 211 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 NFKBIEO00221 500 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 PLCG2P16885 1265 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 USP17L1Q7RTZ2 530 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 LARGE2Q8N3Y3 721 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 IL17RAQ96F46 866 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 PDE6AP16499 860 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 MCCP23508 829 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 TNIP1Q15025 636 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 KIAA1211Q6ZU35 1233 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 AGBL3Q8NEM8 1001 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 DSCC1Q9BVC3 393 aa10.61□□□□□ -0.71
CCR9-203ENST00000395963 PIH1D3Q9NQM4 214 aaKnown RBP10.61□□□□□ -0.71
CCR9-203ENST00000395963 CCDC171Q6TFL3 1326 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms