RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 NCOA7Q8NI08 942 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 IPO4Q8TEX9 1081 aaKnown RBP16.82■□□□□ 0.28
SREBF1-205ENST00000395757 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.82■□□□□ 0.28
SREBF1-205ENST00000395757 PYCARDQ9ULZ3 195 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 V9GYY5 206 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-205ENST00000395757 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 TCHHQ07283 1943 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 CCDC69A6NI79 296 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
SREBF1-205ENST00000395757 PGBD1Q96JS3 809 aa16.82■□□□□ 0.28
SREBF1-205ENST00000395757 MBD4O95243 580 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■□□□□ 9
SREBF1-205ENST00000395757 SLIT1O75093 1534 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 TPM2P07951 284 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 HMGB1P09429 215 aaKnown RBP16.81■□□□□ 0.28
SREBF1-205ENST00000395757 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 ERICH2A1L162 156 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 ALG1Q9BT22 464 aa16.81■□□□□ 0.28
SREBF1-205ENST00000395757 DDX19AQ9NUU7 478 aaKnown RBP16.81■□□□□ 0.28
SREBF1-205ENST00000395757 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 PDIA3P30101 505 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 RASSF8Q8NHQ8 419 aa16.8■□□□□ 0.28
SREBF1-205ENST00000395757 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
SREBF1-205ENST00000395757 DHX16O60231 1041 aaKnown RBP16.8■□□□□ 0.28
SREBF1-205ENST00000395757 RAD21O60216 631 aa16.79■□□□□ 0.28
SREBF1-205ENST00000395757 PRKAB2O43741 272 aa16.79■□□□□ 0.28
SREBF1-205ENST00000395757 LMOD1P29536 600 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-205ENST00000395757 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
SREBF1-205ENST00000395757 BCAMP50895 628 aa16.79■□□□□ 0.28
SREBF1-205ENST00000395757 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
SREBF1-205ENST00000395757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
SREBF1-205ENST00000395757 ARID5BQ14865 1188 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 HELLSQ9NRZ9 838 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 MRVI1Q9Y6F6 885 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-205ENST00000395757 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 ERVV-2B6SEH9 535 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
SREBF1-205ENST00000395757 MCAMP43121 646 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 SLC4A4Q9Y6R1 1079 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 AP5Z1O43299 807 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 ATG3Q9NT62 314 aa16.77■□□□□ 0.28
SREBF1-205ENST00000395757 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.27
SREBF1-205ENST00000395757 MAP3K12Q12852 859 aa16.77■□□□□ 0.27
SREBF1-205ENST00000395757 CEP57L1Q8IYX8 460 aa16.77■□□□□ 0.27
SREBF1-205ENST00000395757 APPBP2Q92624 585 aa16.77■□□□□ 0.27
SREBF1-205ENST00000395757 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.27
SREBF1-205ENST00000395757 COL15A1P39059 1388 aa16.77■□□□□ 0.27
SREBF1-205ENST00000395757 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 C11orf57Q6ZUT1 292 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 SDR42E1Q8WUS8 393 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 DDB1Q16531 1140 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 UBAC1Q9BSL1 405 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 ZSCAN16Q9H4T2 348 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 CYP7A1P22680 504 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
SREBF1-205ENST00000395757 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 SENP2Q9HC62 589 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
SREBF1-205ENST00000395757 ZBTB43O43298 467 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 SERPINC1P01008 464 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 SLC5A1P13866 664 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-205ENST00000395757 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.75■□□□□ 0.27
SREBF1-205ENST00000395757 UVSSAQ2YD98 709 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 NLRP10Q86W26 655 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 RGPD2P0DJD1 1756 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
SREBF1-205ENST00000395757 GYG1P46976 350 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 CTSWP56202 376 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-205ENST00000395757 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 CLIC6Q96NY7 704 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 CARD10Q9BWT7 1032 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
SREBF1-205ENST00000395757 SPTLC2O15270 562 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 PFKFB2O60825 505 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 RESTQ13127 1097 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 TMC6Q7Z403 805 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 MRPS27Q92552 414 aaKnown RBP16.74■□□□□ 0.27
SREBF1-205ENST00000395757 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 IGSF3O75054 1194 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 CBX1P83916 185 aa16.74■□□□□ 0.27
SREBF1-205ENST00000395757 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 TNNT1P13805 278 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms