RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 USP17L1Q7RTZ2 530 aa17.18■□□□□ 0.34
SCAF11-203ENST00000395453 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
SCAF11-203ENST00000395453 FKTNO75072 461 aa17.17■□□□□ 0.34
SCAF11-203ENST00000395453 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
SCAF11-203ENST00000395453 SREBF2Q12772 1141 aa17.17■□□□□ 0.34
SCAF11-203ENST00000395453 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
SCAF11-203ENST00000395453 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
SCAF11-203ENST00000395453 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
SCAF11-203ENST00000395453 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
SCAF11-203ENST00000395453 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 GRM8O00222 908 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 NF2P35240 595 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 CFHR5Q9BXR6 569 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
SCAF11-203ENST00000395453 ZNF646O15015 1829 aaPredicted RBP17.15■□□□□ 0.34
SCAF11-203ENST00000395453 E9PSI1 815 aa17.15■□□□□ 0.34
SCAF11-203ENST00000395453 CHRNDQ07001 517 aa17.15■□□□□ 0.34
SCAF11-203ENST00000395453 IFIT5Q13325 482 aaKnown RBP17.15■□□□□ 0.34
SCAF11-203ENST00000395453 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
SCAF11-203ENST00000395453 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
SCAF11-203ENST00000395453 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
SCAF11-203ENST00000395453 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.33
SCAF11-203ENST00000395453 PRAMEF18Q5VWM3 479 aa17.14■□□□□ 0.33
SCAF11-203ENST00000395453 LMBR1LQ6UX01 489 aa17.14■□□□□ 0.33
SCAF11-203ENST00000395453 MRPL50Q8N5N7 158 aaKnown RBP17.14■□□□□ 0.33
SCAF11-203ENST00000395453 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
SCAF11-203ENST00000395453 SCAF8Q9UPN6 1271 aaKnown RBP17.14■□□□□ 0.33
SCAF11-203ENST00000395453 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
SCAF11-203ENST00000395453 MKRN3Q13064 507 aaKnown RBP17.13■□□□□ 0.33
SCAF11-203ENST00000395453 INTS3Q68E01 1043 aaKnown RBP17.13■□□□□ 0.33
SCAF11-203ENST00000395453 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
SCAF11-203ENST00000395453 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
SCAF11-203ENST00000395453 HTTP42858 3142 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 UTYO14607 1347 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 KLRK1P26718 216 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 SLC4A10Q6U841 1118 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 ARMC9Q7Z3E5 817 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
SCAF11-203ENST00000395453 MMP14P50281 582 aa17.11■□□□□ 0.33
SCAF11-203ENST00000395453 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
SCAF11-203ENST00000395453 KAZALD1Q96I82 304 aa17.11■□□□□ 0.33
SCAF11-203ENST00000395453 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
SCAF11-203ENST00000395453 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
SCAF11-203ENST00000395453 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 SNAP23O00161 211 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 TAF5LO75529 589 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 TTLL5Q6EMB2 1281 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 HELBQ8NG08 1087 aaPredicted RBP17.1■□□□□ 0.33
SCAF11-203ENST00000395453 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 CENPFP49454 3210 aa17.1■□□□□ 0.33
SCAF11-203ENST00000395453 A0A1B0GUL6 1792 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 PTPRCP08575 1304 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 WNT10BO00744 389 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 NBPF7P0C2Y1 421 aaPredicted RBP17.09■□□□□ 0.33
SCAF11-203ENST00000395453 KCNJ4P48050 445 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 INHBEP58166 350 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
SCAF11-203ENST00000395453 LDHAL6AQ6ZMR3 332 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 ZNF594Q96JF6 807 aaPredicted RBP17.09■□□□□ 0.33
SCAF11-203ENST00000395453 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
SCAF11-203ENST00000395453 POTEFA5A3E0 1075 aa17.08■□□□□ 0.32
SCAF11-203ENST00000395453 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
SCAF11-203ENST00000395453 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
SCAF11-203ENST00000395453 SPRYD7Q5W111 196 aa17.08■□□□□ 0.32
SCAF11-203ENST00000395453 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.32
SCAF11-203ENST00000395453 KIAA0100Q14667 2235 aaKnown RBP17.07■□□□□ 0.32
SCAF11-203ENST00000395453 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
SCAF11-203ENST00000395453 IL1R1P14778 569 aa17.07■□□□□ 0.32
SCAF11-203ENST00000395453 GTF2IP78347 998 aa17.07■□□□□ 0.32
SCAF11-203ENST00000395453 ALDH1L2Q3SY69 923 aa17.07■□□□□ 0.32
SCAF11-203ENST00000395453 LDLRAD1Q5T700 205 aa17.07■□□□□ 0.32
SCAF11-203ENST00000395453 OTOP1Q7RTM1 612 aa17.07■□□□□ 0.32
SCAF11-203ENST00000395453 PRKG1Q13976 671 aa17.06■□□□□ 0.32
SCAF11-203ENST00000395453 RABL6Q3YEC7 729 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-203ENST00000395453 APOBEC3FQ8IUX4 373 aaKnown RBP17.06■□□□□ 0.32
SCAF11-203ENST00000395453 FBXW7Q969H0 707 aa17.06■□□□□ 0.32
SCAF11-203ENST00000395453 ZBED3Q96IU2 234 aaPredicted RBP17.06■□□□□ 0.32
SCAF11-203ENST00000395453 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCAF11-203ENST00000395453 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
SCAF11-203ENST00000395453 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
SCAF11-203ENST00000395453 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
SCAF11-203ENST00000395453 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
SCAF11-203ENST00000395453 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
SCAF11-203ENST00000395453 ANGEL1Q9UNK9 670 aaKnown RBP17.05■□□□□ 0.32
SCAF11-203ENST00000395453 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
SCAF11-203ENST00000395453 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 ZNF804AQ7Z570 1209 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
SCAF11-203ENST00000395453 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
SCAF11-203ENST00000395453 BRCA2P51587 3418 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms