RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 VPS72Q15906 364 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CACTINQ8WUQ7 758 aaKnown RBP13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 KIF1BPQ96EK5 621 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 STRCQ7RTU9 1775 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 TRIM27P14373 513 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 RXRBP28702 533 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 PXDNQ92626 1479 aa13.05□□□□□ -0.32
RAPGEF3-202ENST00000395358 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 USP16Q9Y5T5 823 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 ANXA1P04083 346 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 ATP2B2Q01814 1243 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 PDE6BP35913 854 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 SPATA32Q96LK8 384 aa13.04□□□□□ -0.32
RAPGEF3-202ENST00000395358 KIF3CO14782 793 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 PSMD2Q13200 908 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 STX6O43752 255 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 HDXQ7Z353 690 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 CCDC70Q6NSX1 233 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 ELP1O95163 1332 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 GOLGA6L7A0A1B0GV03 622 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 F6X3S4 739 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 BRD1O95696 1058 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 GNAI2P04899 355 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 IRX1P78414 480 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 SGSM3Q96HU1 749 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 RSRC1Q96IZ7 334 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 GNL3LQ9NVN8 582 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-202ENST00000395358 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.32
RAPGEF3-202ENST00000395358 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
RAPGEF3-202ENST00000395358 KIF4AO95239 1232 aa13.02□□□□□ -0.32
RAPGEF3-202ENST00000395358 GOLGA1Q92805 767 aa13.02□□□□□ -0.32
RAPGEF3-202ENST00000395358 CBX8Q9HC52 389 aa13.02□□□□□ -0.32
RAPGEF3-202ENST00000395358 ZSCAN22P10073 491 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 DACT1Q9NYF0 836 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 ERCC3P19447 782 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 TMX4Q9H1E5 349 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF3-202ENST00000395358 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 ATP8B1O43520 1251 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 KCNQ3O43525 872 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 CEP112Q8N8E3 955 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 AFAP1L1Q8TED9 768 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 DDX21Q9NR30 783 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 EXOC6BQ9Y2D4 811 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 ZPR1O75312 459 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 TRMT2AQ8IZ69 625 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
RAPGEF3-202ENST00000395358 SERPINC1P01008 464 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 CABS1Q96KC9 395 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-202ENST00000395358 ELF1P32519 619 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 CNNM3Q8NE01 707 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 ZNF446Q9NWS9 450 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 TFIP11Q9UBB9 837 aaKnown RBP13□□□□□ -0.33
RAPGEF3-202ENST00000395358 FAN1Q9Y2M0 1017 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCT5P48643 541 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
RAPGEF3-202ENST00000395358 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms