RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 MAP3K15Q6ZN16 1313 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 MYH14Q7Z406 1995 aaKnown RBP14.23□□□□□ -0.13
RTN1-203ENST00000395090 LY75O60449 1722 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 GRM8O00222 908 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 SMC5Q8IY18 1101 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 ARID3AQ99856 593 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 ISCA1Q9BUE6 129 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 C9orf78Q9NZ63 289 aaPredicted RBP14.23□□□□□ -0.13
RTN1-203ENST00000395090 HDAC5Q9UQL6 1122 aa14.23□□□□□ -0.13
RTN1-203ENST00000395090 COL5A3P25940 1745 aaPredicted RBP14.22□□□□□ -0.13
RTN1-203ENST00000395090 KCNQ4P56696 695 aa14.22□□□□□ -0.13
RTN1-203ENST00000395090 SLC27A3Q5K4L6 730 aa14.22□□□□□ -0.13
RTN1-203ENST00000395090 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
RTN1-203ENST00000395090 PLSCR2Q9NRY7 297 aa14.22□□□□□ -0.13
RTN1-203ENST00000395090 PLSCR1O15162 318 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
RTN1-203ENST00000395090 ATP8B2P98198 1209 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
RTN1-203ENST00000395090 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
RTN1-203ENST00000395090 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 CCDC191Q8NCU4 936 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 LRRC4BQ9NT99 713 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 FKBPLQ9UIM3 349 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 ARFGEF2Q9Y6D5 1785 aa14.21□□□□□ -0.13
RTN1-203ENST00000395090 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 POM121CA8CG34 1229 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 RPS6KA4O75676 772 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 KCNH2Q12809 1159 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 DCTPP1Q9H773 170 aa14.2□□□□□ -0.14
RTN1-203ENST00000395090 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
RTN1-203ENST00000395090 COL15A1P39059 1388 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 H7C1W4 665 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 MTX1Q13505 466 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 HLFQ16534 295 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 HSP90AB3PQ58FF7 597 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 ARXQ96QS3 562 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 A0A087WZG4 1122 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 CASP7P55210 303 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 VAC14Q08AM6 782 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 KAZALD1Q96I82 304 aa14.19□□□□□ -0.14
RTN1-203ENST00000395090 CWC25Q9NXE8 425 aaPredicted RBP14.19□□□□□ -0.14
RTN1-203ENST00000395090 EP400Q96L91 3159 aa14.18□□□□□ -0.14
RTN1-203ENST00000395090 HMMRO75330 724 aa14.18□□□□□ -0.14
RTN1-203ENST00000395090 CAMTA2O94983 1202 aa14.18□□□□□ -0.14
RTN1-203ENST00000395090 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
RTN1-203ENST00000395090 ZC3H4Q9UPT8 1303 aaKnown RBP14.17□□□□□ -0.14
RTN1-203ENST00000395090 KCNC4Q03721 635 aa14.17□□□□□ -0.14
RTN1-203ENST00000395090 CLEC4GQ6UXB4 293 aa14.17□□□□□ -0.14
RTN1-203ENST00000395090 ZNF34Q8IZ26 560 aa14.17□□□□□ -0.14
RTN1-203ENST00000395090 CCDC24Q8N4L8 307 aa14.17□□□□□ -0.14
RTN1-203ENST00000395090 PNMA6EA0A0J9YXQ4 647 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 S1PR4O95977 384 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 TXNRD1Q16881 649 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 ARMC2Q8NEN0 867 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 GLMNQ92990 594 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 CCDC97Q96F63 343 aaPredicted RBP14.16□□□□□ -0.14
RTN1-203ENST00000395090 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 TAF1LQ8IZX4 1826 aa14.16□□□□□ -0.14
RTN1-203ENST00000395090 ITGBL1O95965 494 aaPredicted RBP14.15□□□□□ -0.14
RTN1-203ENST00000395090 APBA3O96018 575 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 NUCB1Q02818 461 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 UBE3BQ7Z3V4 1068 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 CALR3Q96L12 384 aaKnown RBP14.15□□□□□ -0.14
RTN1-203ENST00000395090 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 RTCBQ9Y3I0 505 aaKnown RBP14.15□□□□□ -0.14
RTN1-203ENST00000395090 SERPINA10Q9UK55 444 aa14.15□□□□□ -0.14
RTN1-203ENST00000395090 PCCAP05165 728 aaPredicted RBP14.14□□□□□ -0.15
RTN1-203ENST00000395090 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
RTN1-203ENST00000395090 RABL6Q3YEC7 729 aaPredicted RBP14.14□□□□□ -0.15
RTN1-203ENST00000395090 EPHA10Q5JZY3 1008 aa14.14□□□□□ -0.15
RTN1-203ENST00000395090 ZBTB38Q8NAP3 1195 aaPredicted RBP14.14□□□□□ -0.15
RTN1-203ENST00000395090 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
RTN1-203ENST00000395090 NUP98P52948 1817 aa14.13□□□□□ -0.15
RTN1-203ENST00000395090 SRGAP3O43295 1099 aa14.13□□□□□ -0.15
RTN1-203ENST00000395090 AMIGO3Q86WK7 504 aa14.13□□□□□ -0.15
RTN1-203ENST00000395090 BICC1Q9H694 974 aaKnown RBP14.13□□□□□ -0.15
RTN1-203ENST00000395090 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
RTN1-203ENST00000395090 AFDNP55196 1824 aaKnown RBP14.13□□□□□ -0.15
RTN1-203ENST00000395090 FOXO4P98177 505 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 CHD1LQ86WJ1 897 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 JARID2Q92833 1246 aaPredicted RBP14.12□□□□□ -0.15
RTN1-203ENST00000395090 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 ZNF652Q9Y2D9 606 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 GPTP24298 496 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 PARP10Q53GL7 1025 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 ANKRD45Q5TZF3 282 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 SKAP1Q86WV1 359 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 GPKOWQ92917 476 aaPredicted RBP eCLIP14.12□□□□□ -0.15
RTN1-203ENST00000395090 UNC93B1Q9H1C4 597 aa14.12□□□□□ -0.15
RTN1-203ENST00000395090 UBN2Q6ZU65 1347 aa14.11□□□□□ -0.15
RTN1-203ENST00000395090 CDHR2Q9BYE9 1310 aa14.11□□□□□ -0.15
RTN1-203ENST00000395090 ZBBXA8MT70 800 aa14.11□□□□□ -0.15
RTN1-203ENST00000395090 NR1H3Q13133 447 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms