RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DLGAP5Q15398 846 aa20.32■□□□□ 0.84
SNCA-205ENST00000394991 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
SNCA-205ENST00000394991 GJA5P36382 358 aa20.31■□□□□ 0.84
SNCA-205ENST00000394991 CAP1Q01518 475 aa20.31■□□□□ 0.84
SNCA-205ENST00000394991 CHRNDQ07001 517 aa20.31■□□□□ 0.84
SNCA-205ENST00000394991 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
SNCA-205ENST00000394991 CLRN2A0PK11 232 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 CSF1RP07333 972 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 INTS3Q68E01 1043 aaKnown RBP20.3■□□□□ 0.84
SNCA-205ENST00000394991 CD99L2Q8TCZ2 262 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 TSR2Q969E8 191 aaKnown RBP20.3■□□□□ 0.84
SNCA-205ENST00000394991 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 PPP2R3BQ9Y5P8 575 aa20.3■□□□□ 0.84
SNCA-205ENST00000394991 PPP1R12BO60237 982 aaPredicted RBP20.29■□□□□ 0.84
SNCA-205ENST00000394991 KCNJ4P48050 445 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 CRHR2Q13324 411 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 GCKRQ14397 625 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 NBPF12Q5TAG4 269 aaPredicted RBP20.29■□□□□ 0.84
SNCA-205ENST00000394991 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 STK31Q9BXU1 1019 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 PTPN22Q9Y2R2 807 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
SNCA-205ENST00000394991 BRCA2P51587 3418 aa20.28■□□□□ 0.84
SNCA-205ENST00000394991 F8W031 263 aaPredicted RBP20.28■□□□□ 0.84
SNCA-205ENST00000394991 CFAP100Q494V2 611 aa20.28■□□□□ 0.84
SNCA-205ENST00000394991 PRMT6Q96LA8 375 aaPredicted RBP20.28■□□□□ 0.84
SNCA-205ENST00000394991 CEP290O15078 2479 aa20.28■□□□□ 0.84
SNCA-205ENST00000394991 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 TAF5LO75529 589 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
SNCA-205ENST00000394991 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
SNCA-205ENST00000394991 ARMC5Q96C12 935 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 PTPN18Q99952 460 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.84
SNCA-205ENST00000394991 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
SNCA-205ENST00000394991 USP2O75604 605 aaPredicted RBP20.26■□□□□ 0.83
SNCA-205ENST00000394991 EN2P19622 333 aaPredicted RBP20.26■□□□□ 0.83
SNCA-205ENST00000394991 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
SNCA-205ENST00000394991 VEZTQ9HBM0 779 aa20.26■□□□□ 0.83
SNCA-205ENST00000394991 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
SNCA-205ENST00000394991 IL1R1P14778 569 aa20.25■□□□□ 0.83
SNCA-205ENST00000394991 SUPT20HL1Q3ZLR7 823 aa20.25■□□□□ 0.83
SNCA-205ENST00000394991 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
SNCA-205ENST00000394991 JAG2Q9Y219 1238 aa20.25■□□□□ 0.83
SNCA-205ENST00000394991 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
SNCA-205ENST00000394991 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
SNCA-205ENST00000394991 IREB2P48200 963 aaKnown RBP20.24■□□□□ 0.83
SNCA-205ENST00000394991 RASA3Q14644 834 aa20.24■□□□□ 0.83
SNCA-205ENST00000394991 TWISTNBQ3B726 338 aaPredicted RBP20.24■□□□□ 0.83
SNCA-205ENST00000394991 MYO1BO43795 1136 aa20.23■□□□□ 0.83
SNCA-205ENST00000394991 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
SNCA-205ENST00000394991 SP3Q02447 781 aa20.23■□□□□ 0.83
SNCA-205ENST00000394991 FLIIQ13045 1269 aa20.23■□□□□ 0.83
SNCA-205ENST00000394991 ANKRD13AQ8IZ07 590 aa20.23■□□□□ 0.83
SNCA-205ENST00000394991 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
SNCA-205ENST00000394991 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
SNCA-205ENST00000394991 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
SNCA-205ENST00000394991 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
SNCA-205ENST00000394991 DNAAF4Q8WXU2 420 aa20.22■□□□□ 0.83
SNCA-205ENST00000394991 ELP3Q9H9T3 547 aa20.22■□□□□ 0.83
SNCA-205ENST00000394991 TRIOBPQ9H2D6 2365 aa20.21■□□□□ 0.83
SNCA-205ENST00000394991 FOXO4P98177 505 aa20.21■□□□□ 0.83
SNCA-205ENST00000394991 CDAN1Q8IWY9 1227 aa20.21■□□□□ 0.83
SNCA-205ENST00000394991 OPTNQ96CV9 577 aa20.21■□□□□ 0.83
SNCA-205ENST00000394991 MS4A4AQ96JQ5 239 aa20.21■□□□□ 0.83
SNCA-205ENST00000394991 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNCA-205ENST00000394991 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
SNCA-205ENST00000394991 SPDYE2Q495Y8 402 aa20.2■□□□□ 0.82
SNCA-205ENST00000394991 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
SNCA-205ENST00000394991 ZNF333Q96JL9 665 aa20.2■□□□□ 0.82
SNCA-205ENST00000394991 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNCA-205ENST00000394991 BRI3BPQ8WY22 251 aa20.19■□□□□ 0.82
SNCA-205ENST00000394991 TEPSINQ96N21 525 aa20.19■□□□□ 0.82
SNCA-205ENST00000394991 ZNF70Q9UC06 446 aaPredicted RBP20.19■□□□□ 0.82
SNCA-205ENST00000394991 IFIT5Q13325 482 aaKnown RBP20.18■□□□□ 0.82
SNCA-205ENST00000394991 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.18■□□□□ 0.82
SNCA-205ENST00000394991 ZNF594Q96JF6 807 aaPredicted RBP20.18■□□□□ 0.82
SNCA-205ENST00000394991 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
SNCA-205ENST00000394991 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
SNCA-205ENST00000394991 FAM205AQ6ZU69 1335 aa20.18■□□□□ 0.82
SNCA-205ENST00000394991 EPHA10Q5JZY3 1008 aa20.17■□□□□ 0.82
SNCA-205ENST00000394991 TDRD3Q9H7E2 651 aaKnown RBP20.17■□□□□ 0.82
SNCA-205ENST00000394991 TNFAIP1Q13829 316 aa20.16■□□□□ 0.82
SNCA-205ENST00000394991 TAF1CQ15572 869 aaPredicted RBP20.16■□□□□ 0.82
SNCA-205ENST00000394991 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
SNCA-205ENST00000394991 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
SNCA-205ENST00000394991 TMEM106CQ9BVX2 250 aa20.16■□□□□ 0.82
SNCA-205ENST00000394991 CCL15-CCL14A0A0B4J2E2 113 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 PLIN1O60240 522 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 VGLL4Q14135 290 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 CCL15Q16663 113 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 FAM43AQ8N2R8 423 aa20.15■□□□□ 0.82
SNCA-205ENST00000394991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.15■□□□□ 0.82
SNCA-205ENST00000394991 TDRD7Q8NHU6 1098 aaKnown RBP20.15■□□□□ 0.82
SNCA-205ENST00000394991 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
SNCA-205ENST00000394991 F6X3S4 739 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms