RNA–Protein interactions for RNA: ENST00000394810.2

SYNPO2L-202, Transcript of synaptopodin 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-202ENST00000394810 SPATA31A6Q5VVP1 1343 aa17.26■□□□□ 0.35
SYNPO2L-202ENST00000394810 GREM2Q9H772 168 aa17.26■□□□□ 0.35
SYNPO2L-202ENST00000394810 RAB11FIP4Q86YS3 637 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 SLC27A2O14975 620 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 CTAGE5O15320 804 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 PDE8BO95263 885 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 CCDC183Q5T5S1 534 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 ALG1Q9BT22 464 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 HAUS7Q99871 368 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
SYNPO2L-202ENST00000394810 TNIP1Q15025 636 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 CCDC129Q6ZRS4 1044 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 MPNDQ8N594 471 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 H7C1W4 665 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 JAG2Q9Y219 1238 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 CCDC148Q8NFR7 591 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
SYNPO2L-202ENST00000394810 RPS6KA4O75676 772 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 RPS6KB1P23443 525 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 GRPEL1Q9HAV7 217 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 SNX14Q9Y5W7 946 aa17.23■□□□□ 0.35
SYNPO2L-202ENST00000394810 BMP15O95972 392 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 SSBP05455 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 TTLL12Q14166 644 aaPredicted RBP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 ZNF532Q9HCE3 1301 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 WDHD1O75717 1129 aaPredicted RBP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 POLA2Q14181 598 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 GJD4Q96KN9 370 aaPredicted RBP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 HSPA4P34932 840 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 CHRNDQ07001 517 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 SERPINC1P01008 464 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 UBE2HP62256 183 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 APOBRQ0VD83 1088 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 VPS72Q15906 364 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 TMC4Q7Z404 712 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 TM6SF1Q9BZW5 370 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
SYNPO2L-202ENST00000394810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 HSP90AA2PQ14568 343 aaPredicted RBP17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 PDILTQ8N807 584 aa17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 PYM1Q9BRP8 204 aaKnown RBP17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 CPDO75976 1380 aa17.21■□□□□ 0.35
SYNPO2L-202ENST00000394810 KDM4FA0A1W2PPD8 638 aa17.21■□□□□ 0.34
SYNPO2L-202ENST00000394810 SYCE3A1L190 88 aa17.21■□□□□ 0.34
SYNPO2L-202ENST00000394810 CHST3Q7LGC8 479 aa17.21■□□□□ 0.34
SYNPO2L-202ENST00000394810 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 ANO10Q9NW15 660 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 NDUFB9Q9Y6M9 179 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 OFD1O75665 1012 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 MTX1Q13505 466 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 CNKSR1Q969H4 720 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 MST1RQ04912 1400 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 CBFA2T2O43439 604 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 SERPINB2P05120 415 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 TNNI2P48788 182 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 DBNLQ9UJU6 430 aaKnown RBP17.2■□□□□ 0.34
SYNPO2L-202ENST00000394810 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 F13A1P00488 732 aa17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 CALML3P27482 149 aa17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 LEMD3Q9Y2U8 911 aa17.19■□□□□ 0.34
SYNPO2L-202ENST00000394810 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 GDPD2Q9HCC8 539 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 TCP11L1Q9NUJ3 509 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 SEMA3EO15041 775 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 CAMK4Q16566 473 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 KLHL40Q2TBA0 621 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 KCNG4Q8TDN1 519 aa17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
SYNPO2L-202ENST00000394810 B4E1Z4 1266 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms