RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 EYA2O00167 538 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 ERC2O15083 957 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 GLRX3O76003 335 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 ITGA6P23229 1130 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 DNAJB2P25686 324 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 CTSWP56202 376 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 TIMM10P62072 90 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 DBNLQ9UJU6 430 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 SH3TC1Q8TE82 1336 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 USP42Q9H9J4 1324 aaKnown RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 PDE8AO60658 829 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 CHMLP26374 656 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 IL15P40933 162 aaPredicted RBP8.43□□□□□ -1.06
RTN4-205ENST00000394609 USPL1Q5W0Q7 1092 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
RTN4-205ENST00000394609 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
RTN4-205ENST00000394609 ZPR1O75312 459 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 COPS2P61201 443 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 PARP10Q53GL7 1025 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 TBC1D9BQ66K14 1250 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 CNTROBQ8N137 903 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 PCDHB3Q9Y5E6 796 aa8.42□□□□□ -1.06
RTN4-205ENST00000394609 ANKRD18BA2A2Z9 1011 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 CIAO1O76071 339 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 NTSR2O95665 410 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 RXRBP28702 533 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 RBM25P49756 843 aaKnown RBP8.41□□□□□ -1.06
RTN4-205ENST00000394609 LDHAL6AQ6ZMR3 332 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 AK7Q96M32 723 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 USP26Q9BXU7 913 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 CEP126Q9P2H0 1117 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 NARFQ9UHQ1 456 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
RTN4-205ENST00000394609 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
RTN4-205ENST00000394609 RFC4P35249 363 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 KMT5BQ4FZB7 885 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 ERFEQ4G0M1 354 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
RTN4-205ENST00000394609 IL25Q9H293 177 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 CNNM1Q9NRU3 951 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 ISY1Q9ULR0 285 aaKnown RBP8.4□□□□□ -1.06
RTN4-205ENST00000394609 BTAF1O14981 1849 aa8.4□□□□□ -1.06
RTN4-205ENST00000394609 A0A1B0GUL7 405 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 REC8O95072 547 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 BECN1Q14457 450 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.07
RTN4-205ENST00000394609 SETDB2Q96T68 719 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 KIF2CQ99661 725 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 RIPOR2Q9Y4F9 1068 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 NHSQ6T4R5 1651 aa8.4□□□□□ -1.07
RTN4-205ENST00000394609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
RTN4-205ENST00000394609 ATP5JP18859 108 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 MLLT3P42568 568 aaPredicted RBP8.39□□□□□ -1.07
RTN4-205ENST00000394609 PTGDRQ13258 359 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 METTL24Q5JXM2 366 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 HELBQ8NG08 1087 aaPredicted RBP8.39□□□□□ -1.07
RTN4-205ENST00000394609 NKX2-3Q8TAU0 364 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 EVI5LQ96CN4 794 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
RTN4-205ENST00000394609 TBC1D2Q9BYX2 928 aa8.39□□□□□ -1.07
RTN4-205ENST00000394609 RGS17Q9UGC6 210 aaPredicted RBP8.39□□□□□ -1.07
RTN4-205ENST00000394609 EIF5BO60841 1220 aaKnown RBP8.38□□□□□ -1.07
RTN4-205ENST00000394609 ADORA1P30542 326 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 TXNRD1Q16881 649 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 POTEAQ6S8J7 498 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 GPR108Q9NPR9 543 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 DIAPH3Q9NSV4 1193 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 NUP98P52948 1817 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 RREB1Q92766 1687 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
RTN4-205ENST00000394609 APBA3O96018 575 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 NBPF5PQ86XG9 351 aaPredicted RBP8.38□□□□□ -1.07
RTN4-205ENST00000394609 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
RTN4-205ENST00000394609 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
RTN4-205ENST00000394609 CICQ96RK0 1608 aaPredicted RBP8.37□□□□□ -1.07
RTN4-205ENST00000394609 SNAP23O00161 211 aa8.37□□□□□ -1.07
RTN4-205ENST00000394609 NPHP1O15259 732 aa8.37□□□□□ -1.07
RTN4-205ENST00000394609 SGSM2O43147 1006 aa8.37□□□□□ -1.07
RTN4-205ENST00000394609 FRAT2O75474 233 aaPredicted RBP8.37□□□□□ -1.07
RTN4-205ENST00000394609 CHGBP05060 677 aa8.37□□□□□ -1.07
RTN4-205ENST00000394609 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms