RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CPA1P15085 419 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 PSMA5P28066 241 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 ADCK5Q3MIX3 580 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 MAGEB6Q8N7X4 407 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 DSCC1Q9BVC3 393 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 ABCF2Q9UG63 623 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 DENND2AQ9ULE3 1009 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
TDP1-203ENST00000393454 CYP46A1Q9Y6A2 500 aa10.33□□□□□ -0.76
TDP1-203ENST00000393454 GPAA1O43292 621 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 HOXA10P31260 410 aaPredicted RBP10.32□□□□□ -0.76
TDP1-203ENST00000393454 PDE6BP35913 854 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 GPSM2P81274 684 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 FBXO33Q7Z6M2 555 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 LEMD3Q9Y2U8 911 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 KLRG2A4D1S0 409 aaPredicted RBP10.32□□□□□ -0.76
TDP1-203ENST00000393454 NBR1Q14596 966 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 TM6SF1Q9BZW5 370 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 RAI14Q9P0K7 980 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 ANKRD31Q8N7Z5 1873 aa10.32□□□□□ -0.76
TDP1-203ENST00000393454 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
TDP1-203ENST00000393454 APPP05067 770 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 NPR1P16066 1061 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
TDP1-203ENST00000393454 KRT32Q14532 448 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 RUFY3Q7L099 469 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 TMX3Q96JJ7 454 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 ZSWIM6Q9HCJ5 1215 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 CHMP5Q9NZZ3 219 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 GGA1Q9UJY5 639 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 NRXN2Q9P2S2 1712 aa10.31□□□□□ -0.76
TDP1-203ENST00000393454 MYH13Q9UKX3 1938 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 TCRBV5S4A2TA0A5A2 114 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 SEMA3EO15041 775 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 UFL1O94874 794 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 CYP21A2P08686 494 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 AK2P54819 239 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
TDP1-203ENST00000393454 GPR101Q96P66 508 aaPredicted RBP10.3□□□□□ -0.76
TDP1-203ENST00000393454 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
TDP1-203ENST00000393454 CTNNA3Q9UI47 895 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 DOCK2Q92608 1830 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 C6orf229H3BNL8 230 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 SRGNP10124 158 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 CYP7A1P22680 504 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 ZNF804AQ7Z570 1209 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 TTC14Q96N46 770 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 ANP32EQ9BTT0 268 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 JAG2Q9Y219 1238 aa10.3□□□□□ -0.76
TDP1-203ENST00000393454 COL1A1P02452 1464 aaPredicted RBP10.29□□□□□ -0.76
TDP1-203ENST00000393454 MBD4O95243 580 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 C2CD5Q86YS7 1000 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 SP8Q8IXZ3 490 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 MASTLQ96GX5 879 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 NEK1Q96PY6 1258 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 TMX4Q9H1E5 349 aaPredicted RBP10.29□□□□□ -0.76
TDP1-203ENST00000393454 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 H0YIN7 160 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 FGAP02671 866 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 RPS6KB1P23443 525 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 IMMTQ16891 758 aaKnown RBP10.29□□□□□ -0.76
TDP1-203ENST00000393454 MIGA1Q8NAN2 632 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 TCEANC2Q96MN5 208 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 ARMT1Q9H993 441 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 LIMCH1Q9UPQ0 1083 aa10.29□□□□□ -0.76
TDP1-203ENST00000393454 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
TDP1-203ENST00000393454 HAND2P61296 217 aa10.28□□□□□ -0.76
TDP1-203ENST00000393454 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
TDP1-203ENST00000393454 PDGFDQ9GZP0 370 aaPredicted RBP10.28□□□□□ -0.76
TDP1-203ENST00000393454 ATP6V0A2Q9Y487 856 aa10.28□□□□□ -0.76
TDP1-203ENST00000393454 QSER1Q2KHR3 1735 aa10.28□□□□□ -0.76
TDP1-203ENST00000393454 IRS2Q9Y4H2 1338 aa10.28□□□□□ -0.76
TDP1-203ENST00000393454 FOXP2O15409 715 aa10.27□□□□□ -0.76
TDP1-203ENST00000393454 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.76
TDP1-203ENST00000393454 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.76
TDP1-203ENST00000393454 TBC1D16Q8TBP0 767 aa10.27□□□□□ -0.76
TDP1-203ENST00000393454 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.76
TDP1-203ENST00000393454 POLLQ9UGP5 575 aa10.27□□□□□ -0.76
TDP1-203ENST00000393454 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.76
TDP1-203ENST00000393454 PDS5AQ29RF7 1337 aaKnown RBP10.27□□□□□ -0.77
TDP1-203ENST00000393454 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
TDP1-203ENST00000393454 E7EWF7 191 aa10.27□□□□□ -0.77
TDP1-203ENST00000393454 ZNF213O14771 459 aa10.27□□□□□ -0.77
TDP1-203ENST00000393454 RIMBP2O15034 1052 aa10.27□□□□□ -0.77
TDP1-203ENST00000393454 DDIT3P35638 169 aa10.27□□□□□ -0.77
TDP1-203ENST00000393454 FGD1P98174 961 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms