RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 DPP8Q6V1X1 898 aaPredicted RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 KRT26Q7Z3Y9 468 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 PPP1R42Q7Z4L9 355 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 USP48Q86UV5 1035 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 WNT2BQ93097 391 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 PGAP2Q9UHJ9 254 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 CNOT7Q9UIV1 285 aaKnown RBP10.45□□□□□ -0.74
CASP4-201ENST00000393150 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
CASP4-201ENST00000393150 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 ARFGEF2Q9Y6D5 1785 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 HOXA10P31260 410 aaPredicted RBP10.44□□□□□ -0.74
CASP4-201ENST00000393150 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
CASP4-201ENST00000393150 RNF186Q9NXI6 227 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 SCN7AQ01118 1682 aa10.44□□□□□ -0.74
CASP4-201ENST00000393150 THSD7BQ9C0I4 1608 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 ERVV-1B6SEH8 477 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 BBOX1O75936 387 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 NEFMP07197 916 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 PIP4K2AP48426 406 aaPredicted RBP10.43□□□□□ -0.74
CASP4-201ENST00000393150 CXCL9Q07325 125 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 KMT5BQ4FZB7 885 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 MPNDQ8N594 471 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 NGEFQ8N5V2 710 aa10.43□□□□□ -0.74
CASP4-201ENST00000393150 RAD17O75943 681 aa10.42□□□□□ -0.74
CASP4-201ENST00000393150 MORN1Q5T089 497 aa10.42□□□□□ -0.74
CASP4-201ENST00000393150 ZMYND15Q9H091 742 aa10.42□□□□□ -0.74
CASP4-201ENST00000393150 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
CASP4-201ENST00000393150 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
CASP4-201ENST00000393150 ATP6V0A2Q9Y487 856 aa10.42□□□□□ -0.74
CASP4-201ENST00000393150 PPP4CP60510 307 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 PUS10Q3MIT2 529 aaKnown RBP10.41□□□□□ -0.74
CASP4-201ENST00000393150 PARP10Q53GL7 1025 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 DDX46Q7L014 1031 aaKnown RBP10.41□□□□□ -0.74
CASP4-201ENST00000393150 BANK1Q8NDB2 785 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 DPF2Q92785 391 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 CFAP53Q96M91 514 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
CASP4-201ENST00000393150 HLFQ16534 295 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 THSD4Q6ZMP0 1018 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 LTBP1Q14766 1721 aa10.4□□□□□ -0.74
CASP4-201ENST00000393150 TNRC18O15417 2968 aaPredicted RBP10.39□□□□□ -0.75
CASP4-201ENST00000393150 GPTP24298 496 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
CASP4-201ENST00000393150 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 HABP4Q5JVS0 413 aaKnown RBP10.39□□□□□ -0.75
CASP4-201ENST00000393150 PNISRQ8TF01 805 aaKnown RBP10.39□□□□□ -0.75
CASP4-201ENST00000393150 CSRNP1Q96S65 589 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 SLC27A5Q9Y2P5 690 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 MAP3K15Q6ZN16 1313 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
CASP4-201ENST00000393150 SPDYE5A6NIY4 337 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 FAM155AB1AL88 458 aaPredicted RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 KCNQ3O43525 872 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 FKBP1BP68106 108 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 TBC1D10BQ4KMP7 808 aaPredicted RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 INTS3Q68E01 1043 aaKnown RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 FBXO46Q6PJ61 603 aaPredicted RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 TRPM4Q8TD43 1214 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 ZIC5Q96T25 663 aa10.38□□□□□ -0.75
CASP4-201ENST00000393150 UTP14AQ9BVJ6 771 aaKnown RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 RRP7AQ9Y3A4 280 aaKnown RBP10.38□□□□□ -0.75
CASP4-201ENST00000393150 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
CASP4-201ENST00000393150 HTATSF1O43719 755 aaKnown RBP10.37□□□□□ -0.75
CASP4-201ENST00000393150 NF2P35240 595 aa10.37□□□□□ -0.75
CASP4-201ENST00000393150 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
CASP4-201ENST00000393150 MTMR2Q13614 643 aa10.37□□□□□ -0.75
CASP4-201ENST00000393150 EYA3Q99504 573 aa10.37□□□□□ -0.75
CASP4-201ENST00000393150 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
CASP4-201ENST00000393150 IBTKQ9P2D0 1353 aaPredicted RBP10.37□□□□□ -0.75
CASP4-201ENST00000393150 SREBF2Q12772 1141 aa10.36□□□□□ -0.75
CASP4-201ENST00000393150 HSP90AB3PQ58FF7 597 aa10.36□□□□□ -0.75
CASP4-201ENST00000393150 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
CASP4-201ENST00000393150 SUSD4Q5VX71 490 aa10.36□□□□□ -0.75
CASP4-201ENST00000393150 NBPF10Q6P3W6 841 aaKnown RBP10.36□□□□□ -0.75
CASP4-201ENST00000393150 PRR14Q9BWN1 585 aa10.36□□□□□ -0.75
CASP4-201ENST00000393150 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
CASP4-201ENST00000393150 BCORQ6W2J9 1755 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
CASP4-201ENST00000393150 MYL6BP14649 208 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 MTMR14Q8NCE2 650 aa10.35□□□□□ -0.75
CASP4-201ENST00000393150 ZNF296Q8WUU4 475 aaPredicted RBP10.35□□□□□ -0.75
CASP4-201ENST00000393150 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms