RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 RANBP6O60518 1105 aaKnown RBP12.22□□□□□ -0.45
CALD1-203ENST00000393118 NR1I2O75469 434 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 TERF1P54274 439 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 MAGEB6Q8N7X4 407 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 FTOQ9C0B1 505 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■□□□ 12.1
CALD1-203ENST00000393118 TRMT1Q9NXH9 659 aaKnown RBP12.22□□□□□ -0.45
CALD1-203ENST00000393118 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 UBR1Q8IWV7 1749 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 APPBP2Q92624 585 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 ZKSCAN3Q9BRR0 538 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
CALD1-203ENST00000393118 XBP1P17861 261 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 STX1AQ16623 288 aa12.22□□□□□ -0.45
CALD1-203ENST00000393118 ZBTB43O43298 467 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.45
CALD1-203ENST00000393118 PRIMPOLQ96LW4 560 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 GREM2Q9H772 168 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
CALD1-203ENST00000393118 C3P01024 1663 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 DDB1Q16531 1140 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 MFSD6Q6ZSS7 791 aa12.21□□□□□ -0.45
CALD1-203ENST00000393118 CTAGE5O15320 804 aa12.21□□□□□ -0.46
CALD1-203ENST00000393118 RAD21O60216 631 aa12.21□□□□□ -0.46
CALD1-203ENST00000393118 TOB2Q14106 344 aaPredicted RBP12.21□□□□□ -0.46
CALD1-203ENST00000393118 CCDC112Q8NEF3 446 aa12.21□□□□□ -0.46
CALD1-203ENST00000393118 MRPS27Q92552 414 aaKnown RBP12.21□□□□□ -0.46
CALD1-203ENST00000393118 FGAP02671 866 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 UQCRFS1P1P0C7P4 283 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
CALD1-203ENST00000393118 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 NOL10Q9BSC4 688 aaKnown RBP12.2□□□□□ -0.46
CALD1-203ENST00000393118 DSCC1Q9BVC3 393 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 MAST3O60307 1309 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 A0A087WWV3 80 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 H7C1W4 665 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 OSBP2Q969R2 916 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 SLC4A4Q9Y6R1 1079 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 MBD4O95243 580 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
CALD1-203ENST00000393118 AOPEPQ8N6M6 819 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 ZBTB1Q9Y2K1 713 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 PXDNLA1KZ92 1463 aa12.2□□□□□ -0.46
CALD1-203ENST00000393118 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
CALD1-203ENST00000393118 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
CALD1-203ENST00000393118 ZFP91Q96JP5 570 aaPredicted RBP12.2□□□□□ -0.46
CALD1-203ENST00000393118 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 M0R2C6 588 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 SPTLC2O15270 562 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 CYP7A1P22680 504 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 PHKBQ93100 1093 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 CARD10Q9BWT7 1032 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 PIGBQ92521 554 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 ZNF652Q9Y2D9 606 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 ZNF335Q9H4Z2 1342 aaPredicted RBP12.19□□□□□ -0.46
CALD1-203ENST00000393118 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
CALD1-203ENST00000393118 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 CLSTN2Q9H4D0 955 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 SLIT1O75093 1534 aa12.19□□□□□ -0.46
CALD1-203ENST00000393118 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
CALD1-203ENST00000393118 PEAK1Q9H792 1746 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 G3V3G9 751 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 SNAP23O00161 211 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 GPATCH11Q8N954 259 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 ZBTB38Q8NAP3 1195 aaPredicted RBP12.18□□□□□ -0.46
CALD1-203ENST00000393118 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
CALD1-203ENST00000393118 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
CALD1-203ENST00000393118 PFKFB2O60825 505 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 TNNT1P13805 278 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 CNNM3Q8NE01 707 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 MYRIPQ8NFW9 859 aa12.18□□□□□ -0.46
CALD1-203ENST00000393118 PDE8AO60658 829 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 PDIA3P30101 505 aaKnown RBP12.17□□□□□ -0.46
CALD1-203ENST00000393118 HLFQ16534 295 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 PCCAP05165 728 aaPredicted RBP12.17□□□□□ -0.46
CALD1-203ENST00000393118 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
CALD1-203ENST00000393118 SYKP43405 635 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 PHKA1P46020 1223 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 CTSWP56202 376 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 GPS2Q13227 327 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 WTAPQ15007 396 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
CALD1-203ENST00000393118 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms