RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CTDNEP1O95476 244 aa30.22■■■□□ 2.43
SMARCD3-203ENST00000392811 UBE3CQ15386 1083 aa30.21■■■□□ 2.43
SMARCD3-203ENST00000392811 FBXL16Q8N461 479 aa30.21■■■□□ 2.43
SMARCD3-203ENST00000392811 RTL9Q8NET4 1388 aa30.21■■■□□ 2.43
SMARCD3-203ENST00000392811 SNAP23O00161 211 aa30.2■■■□□ 2.43
SMARCD3-203ENST00000392811 CCT2P78371 535 aaKnown RBP30.2■■■□□ 2.43
SMARCD3-203ENST00000392811 FAM184AQ8NB25 1140 aa30.2■■■□□ 2.43
SMARCD3-203ENST00000392811 ZNF274Q96GC6 653 aaPredicted RBP30.2■■■□□ 2.43
SMARCD3-203ENST00000392811 BCORQ6W2J9 1755 aa30.2■■■□□ 2.43
SMARCD3-203ENST00000392811 PDIA3P30101 505 aaKnown RBP30.2■■■□□ 2.42
SMARCD3-203ENST00000392811 RNF214Q8ND24 703 aa30.2■■■□□ 2.42
SMARCD3-203ENST00000392811 ZNF652Q9Y2D9 606 aa30.2■■■□□ 2.42
SMARCD3-203ENST00000392811 PDE6AP16499 860 aa30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 LINC00116Q8NCU8 138 aa30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 NAP1L2Q9ULW6 460 aaPredicted RBP30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 ELP1O95163 1332 aa30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 ZNF532Q9HCE3 1301 aa30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 ZNF831Q5JPB2 1677 aa30.19■■■□□ 2.42
SMARCD3-203ENST00000392811 PTPDC1A2A3K4 754 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 LETM1O95202 739 aaPredicted RBP30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 RESTQ13127 1097 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 NCOA5Q9HCD5 579 aaKnown RBP30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 WWC3Q9ULE0 1092 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 H3BQV1 296 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 ZNF213O14771 459 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 IFFO2Q5TF58 517 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 MB21D2Q8IYB1 491 aaPredicted RBP30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 SPATA5Q8NB90 893 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 C8orf37Q96NL8 207 aa30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 GPHNQ9NQX3 736 aaPredicted RBP30.18■■■□□ 2.42
SMARCD3-203ENST00000392811 BCL9LQ86UU0 1499 aa30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 IGHMBP2P38935 993 aaKnown RBP30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 HMGN5P82970 282 aaKnown RBP30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 VPS72Q15906 364 aa30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 TCRBV5S4A2TA0A5A2 114 aa30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 EVCP57679 992 aa30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 NGLY1Q96IV0 654 aa30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 SCAND2PQ9GZW5 306 aaPredicted RBP30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 TFIP11Q9UBB9 837 aaKnown RBP30.17■■■□□ 2.42
SMARCD3-203ENST00000392811 RASGRF1Q13972 1273 aa30.16■■■□□ 2.42
SMARCD3-203ENST00000392811 ESPNB1AK53 854 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 PRC1O43663 620 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 MCM5P33992 734 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 NCOA7Q8NI08 942 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 PDLIM2Q96JY6 352 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 SALL1Q9NSC2 1324 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 CLEC4GQ6UXB4 293 aa30.15■■■□□ 2.42
SMARCD3-203ENST00000392811 KCNQ4P56696 695 aa30.14■■■□□ 2.42
SMARCD3-203ENST00000392811 ANTXR2P58335 489 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 RALYLQ86SE5 291 aaKnown RBP30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 SPATA32Q96LK8 384 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 NBPF3Q9H094 633 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 ZSCAN16Q9H4T2 348 aaPredicted RBP30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 NAA16Q6N069 864 aaPredicted RBP30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 LEO1Q8WVC0 666 aaPredicted RBP30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 KIF3AQ9Y496 699 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 DOCK2Q92608 1830 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 COL4A1P02462 1669 aa30.13■■■□□ 2.41
SMARCD3-203ENST00000392811 CHMP4CQ96CF2 233 aa30.12■■■□□ 2.41
SMARCD3-203ENST00000392811 APPP05067 770 aa30.11■■■□□ 2.41
SMARCD3-203ENST00000392811 FOSBP53539 338 aa30.11■■■□□ 2.41
SMARCD3-203ENST00000392811 CHRNDQ07001 517 aa30.11■■■□□ 2.41
SMARCD3-203ENST00000392811 PTF1AQ7RTS3 328 aa30.11■■■□□ 2.41
SMARCD3-203ENST00000392811 STRBPQ96SI9 672 aaKnown RBP30.11■■■□□ 2.41
SMARCD3-203ENST00000392811 BCAMP50895 628 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 ERFEQ4G0M1 354 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 WDR19Q8NEZ3 1342 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 UBAP1LF5GYI3 381 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 MAP3K12Q12852 859 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 GIMAP6Q6P9H5 292 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 TBC1D10CQ8IV04 446 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 MAGEB6Q8N7X4 407 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 AIDAQ96BJ3 306 aa30.1■■■□□ 2.41
SMARCD3-203ENST00000392811 CNTNAP4Q9C0A0 1308 aa30.09■■■□□ 2.41
SMARCD3-203ENST00000392811 PPFIA3O75145 1194 aa30.09■■■□□ 2.41
SMARCD3-203ENST00000392811 KLF18A0A0U1RQI7 1052 aa30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 CLCN1P35523 988 aa30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 CDC5LQ99459 802 aaKnown RBP30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 LIG1P18858 919 aa30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 C3orf67Q6ZVT6 689 aa30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 KLHL34Q8N239 644 aa30.08■■■□□ 2.41
SMARCD3-203ENST00000392811 FUCA2Q9BTY2 467 aa30.07■■■□□ 2.4
SMARCD3-203ENST00000392811 DENND2AQ9ULE3 1009 aa30.07■■■□□ 2.4
SMARCD3-203ENST00000392811 HPS5Q9UPZ3 1129 aa30.07■■■□□ 2.4
SMARCD3-203ENST00000392811 CARMIL3Q8ND23 1372 aa30.07■■■□□ 2.4
SMARCD3-203ENST00000392811 TRDNQ13061 729 aa30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 SMIM5Q71RC9 77 aa30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 GOLGA6L4A6NEF3 574 aa30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 GOLGA8BA8MQT2 603 aa30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 FDPSP14324 419 aaKnown RBP30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 MYH15Q9Y2K3 1946 aa30.06■■■□□ 2.4
SMARCD3-203ENST00000392811 MBD4O95243 580 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 ALX1Q15699 326 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 FNBP4Q8N3X1 1017 aaPredicted RBP30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 SCN7AQ01118 1682 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 SF3B3Q15393 1217 aaKnown RBP30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 BICDL1Q6ZP65 573 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 NKX2-3Q8TAU0 364 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 CFAP45Q9UL16 551 aa30.05■■■□□ 2.4
SMARCD3-203ENST00000392811 ADD1P35611 737 aaKnown RBP30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms